Query= MSMg01no064_g21.b1 MSMg01no064_g21.b1 CHROMAT_FILE:
MSMg01no064_g21.b1 PHD_FILE: MSMg01no064_g21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:21 2005
(452 letters)
>mm_chr14_113632802_113633653
Length = 852
Score = 814 bits (421), Expect = 0.0
Identities = 446/459 (97%), Gaps = 8/459 (1%)
Strand = Plus / Minus
Query: 1 ccattttcaatagcaaagtggagcataaatgaaccatacaaggctaagatcttcacctgc 60
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 588 ccattttcaatagcaaagtggagcataaatgaaagagacaaggctaagatcttcacctgc 529
Query: 61 tgctagtcaaatactgcatgtggatgtaagttaactcagtgatttcaggacaccacagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tgctagtcaaatactgcatgtggatgtaagttaactcagtgatttcaggacaccacagag 469
Query: 121 aatgccaatttaatatcatcctgtgatatagtgcattctaggcacttatgtaagtatgtg 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 468 aatgccaatttaatatcatcctgtgatacagtgcattctaggcacttatgtaagtatgtg 409
Query: 181 gttaagtccctttggcaaataatctcaatttttctttatagcttttcctgctctactgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gttaagtccctttggcaaataatctcaatttttctttatagcttttcctgctctactgtc 349
Query: 241 aatctgttagctgttattattcattgttaccaatgtatgttacattttaacctaccattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aatctgttagctgttattattcattgttaccaatgtatgttacattttaacctaccattt 289
Query: 301 tcacatttcaccttcatatcttcatgttctataaatatagtgaagactgttaaattaata 360
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 288 tcacatttcaccttcatatcttcatgttctataaatatagcgaagactgttaaattaata 229
Query: 361 ttgttgagtactctcctctctctctctg--------gtgtgtgtgtgtgtgtgtgtgaga 412
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 228 ttgttgagtactctcctctctctctctggtgtgtgtgtgtgtgtgtgtgtgtgtgtgaga 169
Query: 413 gagagagagagagagagagagagagagagagagagagag 451
|||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gagagagagagagagagagagagagagagagagagagag 130
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 90
Number of extensions: 35
Number of successful extensions: 35
Number of sequences better than 10.0: 1
Number of HSP's gapped: 32
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no064_g21.g1 MSMg01no064_g21.g1 CHROMAT_FILE:
MSMg01no064_g21.g1 PHD_FILE: MSMg01no064_g21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:09:22 2005
(382 letters)
>mm_chr14_113568121_113568902
Length = 782
Score = 706 bits (365), Expect = 0.0
Identities = 377/381 (98%)
Strand = Plus / Plus
Query: 1 aaaaatattctggtgatttttttttattgtttgtattttgactaatttaaaattgcattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aaaaatattctggtgatttttttttattgtttgtattttgactaatttaaaattgtattg 260
Query: 61 ttttatccacatttctggctaactacctatttcccatgggaagtagaataatgttgaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttatccacatttctggctaactacctatttcccatgggaagtagaataatgttgaaaa 320
Query: 121 tatcacccatatctaaagcaagagcaaacttatcactacaaatcaaatgcaagtgtactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatcacccatatctaaagcaagagcaaacttatcactacaaatcaaatgcaagtgtactc 380
Query: 181 ttattaccagcattcaccccttggatatattcaggtatgtggtcactatttaacaattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttattaccagcattcaccccttggatatattcaggtatgtggtcactatttaacaattaa 440
Query: 241 tctacaggatgatccttgcctaccttaaaacccacctagtctatggggtgccatgtaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 441 tctacaggatgatccttgcctaccttaaaacccacctagtctatggggtgccaggtaatt 500
Query: 301 aaatgttttcttcaaactttgagacatttactcatttatatcagcaaaggcagaacactg 360
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 501 aaatgttttcttcaaactttgagacatttacacatttatttcagcaaaggcagaacactg 560
Query: 361 ataaaatgacatttcccagag 381
|||||||||||||||||||||
Sbjct: 561 ataaaatgacatttcccagag 581
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
