Query= MSMg01no065_e21.b1 MSMg01no065_e21.b1 CHROMAT_FILE:
MSMg01no065_e21.b1 PHD_FILE: MSMg01no065_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:46 2005
(565 letters)
>mm_chr14_105859851_105860815
Length = 965
Score = 1035 bits (535), Expect = 0.0
Identities = 553/559 (98%)
Strand = Plus / Plus
Query: 7 gaattctaggatatacattacatgttaaaaatataaataatggggctggagagatggctc 66
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctaggatataaattacatgttaaaaatataaataatggggctggagagatggctc 266
Query: 67 agcagttaagctcactgactgctcttccgaaggtctggagttcaaattccagcaatcaca 126
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 agcggttaagctcactgactgctcttccgaaggtctggagttcaaattccagcaatcaca 326
Query: 127 tggtggctcacaaccatccgtaatgagatctgatgcccccttctggagtgtctgaagtca 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tggtggctcacaaccatccgtaatgagatctgatgcccccttctggagtgtctgaagtca 386
Query: 187 gctacagtgtacttaagaaataataaataaatcttttaaaaatataaataatatgtttct 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gctacagtgtacttaagaaataataaataaatcttttaaaaatataaataatatgtttct 446
Query: 247 ttgatgtctttgtaatttacagttattactcatctttattaaaattcggtttctctttat 306
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 447 ttgatgtctttgtaatttacagttattactcatcaatattaaaattcggtttctctttat 506
Query: 307 ttttctctaaaaaattctatgatgatccacattgaggtacagttcaggtttttgtatgac 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttttctctaaaaaattctatgatgatccacattgaggtacagttcaggtttttgtatgac 566
Query: 367 ttacagcacctggctgtgtctcgtttagacatctatccatcacactttcagtgatgctta 426
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 ttacagcagctggctgtgtctcgtttagacatctatccatcacactttcagtgatgctta 626
Query: 427 ataatatgctgaggctgcacaggcacccaacaaactcagagactctgagcaatttctaag 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ataatatgctgaggctgcacaggcacccaacaaactcagagactctgagcaatttctaag 686
Query: 487 gcaatgtataatcatgtccaatattcaaacagataggaagttttctttagcagtgggctg 546
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gtaatgtataatcatgtccaatattcaaacagataggaagttttctttagcagtgggctg 746
Query: 547 tcagctaggagttaaatga 565
|||||||||||||||||||
Sbjct: 747 tcagctaggagttaaatga 765
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no065_e21.g1 MSMg01no065_e21.g1 CHROMAT_FILE:
MSMg01no065_e21.g1 PHD_FILE: MSMg01no065_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:10:46 2005
(565 letters)
>mm_chr14_106030390_106031352
Length = 963
Score = 1035 bits (535), Expect = 0.0
Identities = 554/561 (98%), Gaps = 2/561 (0%)
Strand = Plus / Minus
Query: 1 acagaaagctgggggaaatacatccaaaaacatgattcaaatataatgaagttttaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 559 acagaaagctgggggaaatacatccaaaaacatgattcaaatataatgaag--ctaaaaa 502
Query: 61 aataatacaaggttgcatgtgacattgttaattgagactatacacaaaggggactgggaa 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatgatacaaggttgcatgtgacattgttaattgagactatacacaaaggggactgggaa 442
Query: 121 cctaagctgcttaggacaggtgtcaccagaagcccttacagaaggaataagtaggtgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctaagctgcttaggacaggtgtcaccagaagcccttacagaaggaataagtaggtgttt 382
Query: 181 aggggaggaagacagaaagctgttcaaggcactgacgctccacacagaaagccatgggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggggaggaagacagaaagctgttcaaggcactgacgctccacacagaaagccatgggag 322
Query: 241 ctcattatcacattctatgatgccaacctcagaaattaacagccttgagttgcaggtgga 300
|||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcaatagcacattctatgatgccaacctcagaaattaacagccttgagttgcaggtgga 262
Query: 301 aggtgcagaagccaaattaaaaacagtcttttcaggctgagctcaggagcctgaatttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtgcagaagccaaattaaaaacagtcttttcaggctgagctcaggagcctgaatttcc 202
Query: 361 atgctgtaagtggctgggatccactggaggattttaattgtgtaagttgacaagatcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgctgtaagtggctgggatccactggaggattttaattgtgtaagttgacaagatcaga 142
Query: 421 tttgctattcagaaagcacaccctggcacagatcggtgggtggaatagaaagtggttacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 141 tttgctattcagaaagcacaccctggcacagatcggtgggtggaatagaaagtggttgcc 82
Query: 481 ctggagacaggcagacccattaggaagctctgacaaagatccaggagagagaaaatgagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 ctggagacaggcagacccattaggaagctctgacaaagatccaggagagagaaaatgagg 22
Query: 541 atagtggttggaggaatgagc 561
|||||||||||||||||||||
Sbjct: 21 atagtggttggaggaatgagc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 963
Length adjustment: 10
Effective length of query: 555
Effective length of database: 953
Effective search space: 528915
Effective search space used: 528915
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
