Query= MSMg01no067_d13.b1 MSMg01no067_d13.b1 CHROMAT_FILE:
MSMg01no067_d13.b1 PHD_FILE: MSMg01no067_d13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:16 2005
(282 letters)
>mm_chr14_122073004_122073685
Length = 682
Score = 476 bits (246), Expect = e-139
Identities = 273/282 (96%)
Strand = Plus / Plus
Query: 1 gcccttagctcatgatcttcttgctacagcctttgagcactgctgacactaggggtgtac 60
|||||||| |||| ||||||||||| |||||| ||||||||||||| |||||||||||||
Sbjct: 201 gcccttagttcattatcttcttgcttcagcctctgagcactgctgagactaggggtgtac 260
Query: 61 acaaccactcagagcttgtcgccttatttctatccattaagattcttattccagctaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acaaccactcagagcttgtcgccttatttctatccattaagattcttattccagctaaag 320
Query: 121 gctggaccaaaaatcaacatcaaaaccagcaatgaatagcagaatagattgttctttccc 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 321 gctggaccaaaaatcaacatcaaaaccagcaaagaatagcagaatagattgttctttccc 380
Query: 181 ttctccttgctcagtaacattatgcaaattacctaatctttcacattttattttcctcat 240
||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 381 ttctccttgctcagtaacattatgcaaattacctaatctttcacagtttactttcctcat 440
Query: 241 ctatagcaaaggggacaactactactccttctctgaggaatc 282
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 441 ctatagcaaaggggacaactactactccttctttgaggaatc 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no067_d13.g1 MSMg01no067_d13.g1 CHROMAT_FILE:
MSMg01no067_d13.g1 PHD_FILE: MSMg01no067_d13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:16 2005
(101 letters)
>mm_chr14_122184509_122185012
Length = 504
Score = 172 bits (89), Expect = 4e-48
Identities = 100/105 (95%), Gaps = 5/105 (4%)
Strand = Plus / Minus
Query: 1 atataagcttactttttcg-agatggaaggtcacttagagaggttatcaggtcta---tc 56
||||||||||||||||| | ||||||||||||||||||||||||||||||||||| ||
Sbjct: 304 atataagcttacttttt-gtagatggaaggtcacttagagaggttatcaggtctagcttc 246
Query: 57 ctcattttagaggcaggtggggtctatctcggctcatagctagta 101
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctcattttagaggcaggtggggtctatctcggctcatagctagta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 101
Length of database: 504
Length adjustment: 8
Effective length of query: 93
Effective length of database: 496
Effective search space: 46128
Effective search space used: 46128
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
