Query= MSMg01no067_i21.b1 MSMg01no067_i21.b1 CHROMAT_FILE:
MSMg01no067_i21.b1 PHD_FILE: MSMg01no067_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:41 2005
(322 letters)
>mm_chr14_115648102_115648829
Length = 728
Score = 547 bits (283), Expect = e-160
Identities = 309/321 (96%), Gaps = 6/321 (1%)
Strand = Plus / Plus
Query: 5 gaattctaccaggcatttcttgatacactgtataacacaacaagtataatccagttttac 64
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 205 gaattctaccaggcatttcttgatacactgtataacacaacaaatataatccagttttac 264
Query: 65 ctaaggaaattagtatcaactaaaaataagatgtagacactatgagaaatcataggtagg 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctaaggaaattagtattaactaaaaataagatgtagacactatgagaaatcataggtagg 324
Query: 125 gaaaaataagacaaatctaaagaaataaagctatttaaacagagttggatcattctgtgt 184
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 325 gaaaaataagacaaatctaaagaaataaagctatttaaacagagttgggtcattctgtgt 384
Query: 185 cagtgagcatttccagcatacaagagcaccatgtcagcatattggagaagacttca---- 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagtgagcatttctagcatacaagagcaccatgtcagcatattggagaagacttcaggtt 444
Query: 241 --caggtgtgctgcaacaagagggagcacagcctgtttcatacataggacttagcagcat 298
|||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 445 cacaggtgtgctgcaacaagagggagcacagcctgtttcagacagaggacttagcagcat 504
Query: 299 ctggctgatgttgcacctgtg 319
|||||||||||||||||||||
Sbjct: 505 ctggctgatgttgcacctgtg 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 728
Length adjustment: 9
Effective length of query: 313
Effective length of database: 719
Effective search space: 225047
Effective search space used: 225047
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_i21.g1 MSMg01no067_i21.g1 CHROMAT_FILE:
MSMg01no067_i21.g1 PHD_FILE: MSMg01no067_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:13:41 2005
(253 letters)
>mm_chr14_115838955_115839607
Length = 653
Score = 427 bits (221), Expect = e-124
Identities = 245/253 (96%)
Strand = Plus / Minus
Query: 1 caggacagccagggctacacagaaaaaccctgtctcaaaaaaacaaaacaacccaaaaca 60
|||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 573 caggacagccagggctacacagaaaaaccctgtctcaacaaaacaaaacaaaacaaaaca 514
Query: 61 aaataaacaaacaaataaaaacaaaaccaaaaaaccaaaacaacaacaaaaaaaagaaaa 120
||||||||||||||| |||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 513 aaataaacaaacaaacaaaaacaaaaacaaaaaacaaaaacaacaacaaaaaaaagaaaa 454
Query: 121 gtaactcagttgatgataaatgactttgaatcactgattcatcacaaagtctccacccat 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 gtaactcaattgatgataaatgactttgaatcactgattcatcacaaagtctccacccat 394
Query: 181 atataccgaggcctttgtgttcaatgaacatccaaattgccaggaacttgggtgtgccta 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 393 atataccgaggcctttgtgttcagtgaacatccaaattgccaggaacttgggtgtgccta 334
Query: 241 gaaaaggtatgaa 253
|||||||||||||
Sbjct: 333 gaaaaggtatgaa 321
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 253
Length of database: 653
Length adjustment: 9
Effective length of query: 244
Effective length of database: 644
Effective search space: 157136
Effective search space used: 157136
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
