Query= MSMg01no070_l04.b1 MSMg01no070_l04.b1 CHROMAT_FILE:
MSMg01no070_l04.b1 PHD_FILE: MSMg01no070_l04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:51 2005
(575 letters)
>mm_chr14_25070163_25071138
Length = 976
Score = 1065 bits (551), Expect = 0.0
Identities = 569/577 (98%), Gaps = 5/577 (0%)
Strand = Plus / Plus
Query: 4 ggaattctctgtaagacactgccatgttgggctggagagatggctcagtggttaagagca 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ggaattctctgtaagaaactgccatgttgggctggagagatggctcagtggttaagagca 259
Query: 64 ctgactgcttttctaaaggtcctgagttcaattcccagcaaccacatagtggctcacaac 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctgactgcttttctaaaggtcctgagttcaattcccagcaaccacatagtggctcacaac 319
Query: 124 catctgtaatgggatccaatgccttcttctgatgtgtctgaaggcagctacagtgtactc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 catctgtaatgggatccaatgccttcttctgatgtgtctgaaggcagctacagtgtactc 379
Query: 184 atataaataaataaatcttaaaaaaaaaaaga----gagagagattgaaagaaagaaagt 239
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 380 atataaataaataaatcttaaaaaaaaaaagaaagagagagagattgaaagaaagaaagt 439
Query: 240 gccatgtttcccagaacatgaatgttatatctgaaatgatggtggcctgcttggggaaaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gccatgtttcccagaacatgaatgttatatctgaaatgatggtggcctgcttggggaaaa 499
Query: 300 attactttgactctctgtaactttgtgaaccttggagacatttcccggcctcttgctttg 359
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 500 attactttgactctctgtaactttgtgaaccttggagacatttcctggcctcttgctttg 559
Query: 360 ttcctagtttgagaatggcccgaagccaagtgctcttggttaaaa-tctagggcatgccc 418
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||
Sbjct: 560 ttcctagtttgagaatggcccgaagccaagtgctcttggttaaaaatctagggcatggcc 619
Query: 419 atttccagtaaagaatcctgcccagaggacacaagacaaggcagaatcctgggatcagag 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atttccagtaaagaatcctgcccagaggacacaagacaaggcagaatcctgggatcagag 679
Query: 479 actggaagtctttgacaaccttggattaaaccagaggaaggattatccaatggttaatga 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 actggaagtctttgacaaccttggattaaaccagaggaaggattatccaatggttaatga 739
Query: 539 ctccataaataattattgattgagtgcctgcttgtgc 575
|||||||||||||||||||||||||||||||||||||
Sbjct: 740 ctccataaataattattgattgagtgcctgcttgtgc 776
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 976
Length adjustment: 10
Effective length of query: 565
Effective length of database: 966
Effective search space: 545790
Effective search space used: 545790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_l04.g1 MSMg01no070_l04.g1 CHROMAT_FILE:
MSMg01no070_l04.g1 PHD_FILE: MSMg01no070_l04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:51 2005
(527 letters)
>mm_chr14_25206597_25207523
Length = 927
Score = 895 bits (463), Expect = 0.0
Identities = 511/527 (96%)
Strand = Plus / Plus
Query: 1 aggattactctcttctgattttgctgttctctttgctttgggtcttctgagtgtagctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aggattactctcttctgattttgctgttctctttgctttgggtcttctgagtgtatctgt 260
Query: 61 catggctgtattcatctcttccttaggtcttcattggaacctaggtcctgttggggttac 120
||||||||||||| |||||| ||||||||||||| ||||||| |||||||||||||||||
Sbjct: 261 catggctgtattcgtctctttcttaggtcttcatgggaacctgggtcctgttggggttac 320
Query: 121 tggggccctgaagaagggctggcaggaggagactgccaggggcttactgtgtggaggtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggggccctgaagaagggctggcaggaggagactgccaggggcttactgtgtggaggtcg 380
Query: 181 tttccagaaacctgttcttcaggtgaagaacaacttggaaatactgagggaggaaaacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttccagaaacctgttcttcaggtgaagaacaacttggaaatactgagggaggaaaacca 440
Query: 241 aaaaatgaaggaggattttgcactactgcagcatcacttggcaaaagtgtagtcaaatta 300
|||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| |
Sbjct: 441 aaaaatgaaggaggattttgcattactgcagcatcacttggcaaaattgtagtcaaatga 500
Query: 301 taagaagcaacaggaagataccagtaacccatagacccagcaccaaaaggcatggagagg 360
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taagaagcaacagaaagataccagtaacccatagacccagcaccaaaaggcatggagagg 560
Query: 361 catctgggtatggataatgccttacaccatttcccactggacttcctatcttctctatga 420
||||||||||||| |||||||||||||||||||||| ||| ||| || ||| ||||||||
Sbjct: 561 catctgggtatggttaatgccttacaccatttcccattgggctttctgtctactctatga 620
Query: 421 cccacctctgctttcacccattacctttctaatccacactcccatccagccacccaacac 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 cccacctctgctttcacccattacctttctaatccacactcccatccagccacccagcac 680
Query: 481 attaatgtgatggtttatgtctgtgtctatgcacaaatattctggga 527
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 attaatgtgatggtttatgtctgtgtctatgcacaaatattctggga 727
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 927
Length adjustment: 10
Effective length of query: 517
Effective length of database: 917
Effective search space: 474089
Effective search space used: 474089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
