Query= MSMg01no072_j11.b1 MSMg01no072_j11.b1 CHROMAT_FILE:
MSMg01no072_j11.b1 PHD_FILE: MSMg01no072_j11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:23 2005
(655 letters)
>mm_chr14_112580058_112581109
Length = 1052
Score = 1069 bits (553), Expect = 0.0
Identities = 624/649 (96%), Gaps = 3/649 (0%)
Strand = Plus / Plus
Query: 6 aattccatgcagcacccagagtctcgctatctcccttcatattaggatataaaggcctca 65
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 206 aattccatgcagcacccagagtctctctatctcccttcatattaggatataaagacctca 265
Query: 66 gaaattactccagtgcttaattgctaaccactctgctctgcggagcataatgatatcaga 125
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 266 gaaattactccagtgcttaattgctaaccactctgctccacggagcataatgatatcaga 325
Query: 126 acaacctctgacacttaaggaaaatctcaattaacaatcttttttattagtgttgctttc 185
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gcaacctctgacacttaaggaaaatctcaattaacaatcttttttattagtgttgctttc 385
Query: 186 gttatggcgtccctttcgagcagtataacactgattaaaacaactagaattttagaggac 245
||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 386 gttatggcgtccctttccagcagtagaacactgattaaaacaactagaattttagagggc 445
Query: 246 tttgtttttcttttctttttttcaacatggtcaattgaattctatgttttcataaattgt 305
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tttttttttcttttctttttttcaacatggtcaattgaattctatgttttcataaattgt 505
Query: 306 agtgtccatttctacactctatcaacaaagatgatagttaacagtatgataaaacctgtt 365
|||||||| ||||||| ||| ||||||||||| ||||| ||||| |||||||||| || |
Sbjct: 506 agtgtccaattctacagtctttcaacaaagataatagtcaacaggatgataaaacatgct 565
Query: 366 taatctggtttttaaaatattctgaattattcactctctactccctatatctttgtcaaa 425
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 taatctgctttttaaaatattctgaattattcactctctactccctatatctttgtcaaa 625
Query: 426 accatatactgtgcatctaatttcagtttttctagagtttgcttggaattatacatttga 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 accatatactgtgcatctaatttcagtttttctagagtttgcttggaattatacatttga 685
Query: 486 tgctcttttattcaggtagtttgtgattctctcctctttttttcactatcatttcaataa 545
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 686 tgctcttttattcaggtagtttgtgattctctcct---tttttcactatcatttcaataa 742
Query: 546 ataatcatattgcttttgctaccttctatagtagcaaagacatcttaatgacttttagat 605
|||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 743 ataatcatatcacttttgctaccttctacagtagcaaagacatcttaatgacttttagat 802
Query: 606 tgggggaattagaaataatgttgctataaacaatttagtatgtttgtgg 654
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ggggggaattagaaataatgttgctataaacaatttagtatgtttgtgg 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1052
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1042
Effective search space: 672090
Effective search space used: 672090
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no072_j11.g1 MSMg01no072_j11.g1 CHROMAT_FILE:
MSMg01no072_j11.g1 PHD_FILE: MSMg01no072_j11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:20:23 2005
(511 letters)
>mm_chr14_112628547_112629457
Length = 911
Score = 797 bits (412), Expect = 0.0
Identities = 421/424 (99%)
Strand = Plus / Minus
Query: 88 caagatctgaacgatgataatgccaacacatatgctaatgcagaagggaaaatttcatga 147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 caagatctgaacgatgataatgccaacacatatgctaatgcagaagggaaaatttcatga 852
Query: 148 tatctcatgcctagccaaagaaatacaggcatctaatgaatgttgaaagaattagctgcc 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 851 tatctcatgcctagccaaagaaatacaggcatctaatgaatgttgaaagaattagctgcc 792
Query: 208 ctcatggctgagctgtctaagtggtcaatgttgaaagtatatacatacaaaaaatgactc 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 791 ctcatggctgagctgtctaagtggtcaatgttgaaagtatatacatacaaaaaatgactc 732
Query: 268 aggttttatttaactattcatacaacacattgaacatgtatgtacacacaggaagtagtc 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 aggttttatttaactattcatacaacacattgaacatgtatgtacacacaggaagtagtc 672
Query: 328 attactttgttgaaaagaaatgggtggtcatgtgaaggattggagggaggggacagagga 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 attactttgttgaaaagaaatgggtggtcatgtgaaggattggagggaggggacagagga 612
Query: 388 atggtaggaggaaaaaatgaagaggtgaacgatgcaattgtattttaattatcaaggact 447
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 611 atggtaggaggaaaaaatgaagaggtgaacgatgcaattgtattttaattatctaggact 552
Query: 448 attaagtgtggtaaggtgattaaggatcaaaaggaaggttactgctttgcattgaaaaga 507
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 551 attaagggtggtaaggtgattaaggatcaaaaggaaggttactgctttgcattaaaaaga 492
Query: 508 tagg 511
||||
Sbjct: 491 tagg 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
