Query= MSMg01no073_j23.b1 MSMg01no073_j23.b1 CHROMAT_FILE:
MSMg01no073_j23.b1 PHD_FILE: MSMg01no073_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:44 2005
(391 letters)
>mm_chr14_24071548_24072338
Length = 791
Score = 592 bits (306), Expect = e-173
Identities = 361/390 (92%), Gaps = 21/390 (5%)
Strand = Plus / Plus
Query: 5 gaatt-catcctgtcttc-ttcacctcaaagcttgcaactctttttgtttggttgggttt 62
||||| || ||||||||| ||||||||||||||| ||||||||||||||||||| |||||
Sbjct: 220 gaattccaccctgtcttcattcacctcaaagcttacaactctttttgtttggtt-ggttt 278
Query: 63 tt-tgttttgttttgttttgtttttaaaataactctagtgttgaacacagtgactgcggt 121
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ttgtgttttgttttgttttgtttttaaaataactctagtgttgaacacagtgactgcggt 338
Query: 122 ttaggcactctaacgtgacacaaggtgtttgtttgtttgtttgtttgtttgttagccaga 181
|||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 339 ttaggcactctaacgtgacacaaggtgtttgttt-----------------ttagccaga 381
Query: 182 tctttacaatagtaaacattagaagagtgagttcacttttctggtttaaccatttagact 241
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tctttacaatagtaaacgttagaagagtgagttcacttttctggtttaaccatttagact 441
Query: 242 cagccccagaagcaagacaaacggctgtaagctactgcttatagatggcccagatcaatg 301
|||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||
Sbjct: 442 cagccccagaagcaaggcaaatggctgtaagctactgcttagagatggcccagatcaatg 501
Query: 302 cctctcggaaggtatacattctctcatgatactgaactgcttcaggtcatctgacagaaa 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cctctcggaaggtatacattctctcatgatactgaactgcttcaggtcatctgacagaaa 561
Query: 362 ttagttatgggctctcgtccagtaagagga 391
||||||||||||| | ||||||||||||||
Sbjct: 562 ttagttatgggcttttgtccagtaagagga 591
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 791
Length adjustment: 9
Effective length of query: 382
Effective length of database: 782
Effective search space: 298724
Effective search space used: 298724
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_j23.g1 MSMg01no073_j23.g1 CHROMAT_FILE:
MSMg01no073_j23.g1 PHD_FILE: MSMg01no073_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:45 2005
(420 letters)
>mm_chr14_24228420_24229237
Length = 818
Score = 750 bits (388), Expect = 0.0
Identities = 410/418 (98%), Gaps = 2/418 (0%)
Strand = Plus / Minus
Query: 1 ctacttgagatttttggagttttctttaggggaggggcatttacttagtttggcaagaat 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 616 ctacttgagatttttggagttttctttaggggaggggcatttacatagtttggcaagaat 557
Query: 61 tggagacctacctggctgtgctccatctatttccttttcttacccagtatttctttctcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tggagacctacctggctgtgctccatctatttccttttcttacccagtatttctttctcc 497
Query: 121 atacaccattcttcccaattgaataaaccttgagcgtgttgaaggtgacagaggtggtca 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 atacaccatttttcccaattgaataaaccttgagcgtgttgaaggtgacagaggtggtca 437
Query: 181 gctcaagggctgttgtgatagtattggcttaggcagagcattggacaaatgaggccacca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gctcaagggctgttgtgatagtattggcttaggcagagcattggacaaatgaggccacca 377
Query: 241 gctgggacacatgaccagcccctaagggtcctggcttcaacagcgtgtggtagcttcagt 300
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 376 actgggacacatgaccagcccctaagggtcctggcttcaacagtgtgtggtagcttcagt 317
Query: 301 tccagatcatggaaattatttttgaacatctcttagtatggcagggacgctttccccctc 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 316 tccagatcatggaaattatttttgaacatctcttagtatggcagggatgctttccccctc 257
Query: 361 ccatctctctcagggagacagtgtgtctccttccatctacagaatctacagagggggg 418
|||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 256 ccatctctctcagggagacaatgt--ctccttccatctacagaatctacagagggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 818
Length adjustment: 9
Effective length of query: 411
Effective length of database: 809
Effective search space: 332499
Effective search space used: 332499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|