Query= MSMg01no074_n08.b1 MSMg01no074_n08.b1 CHROMAT_FILE:
MSMg01no074_n08.b1 PHD_FILE: MSMg01no074_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:20 2005
(370 letters)
>mm_chr14_25070161_25070930
Length = 770
Score = 675 bits (349), Expect = 0.0
Identities = 361/367 (98%), Gaps = 4/367 (1%)
Strand = Plus / Plus
Query: 6 ggaattctctgtaacaaactgccatgttgggctggagagatggctcagtggttaagagca 65
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattctctgtaagaaactgccatgttgggctggagagatggctcagtggttaagagca 261
Query: 66 ctgactgcttttctaaaggtcctgagttcaattcccagcaaccacatagtggctcacaac 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ctgactgcttttctaaaggtcctgagttcaattcccagcaaccacatagtggctcacaac 321
Query: 126 catctgtaatgggatccaatgccttcttctgatgtgtctgaaggcagctacagtgtactc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 catctgtaatgggatccaatgccttcttctgatgtgtctgaaggcagctacagtgtactc 381
Query: 186 atataaataaataaatcttaaaaaaaaaaaga----gagagagattgaaagaaagaaagt 241
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 382 atataaataaataaatcttaaaaaaaaaaagaaagagagagagattgaaagaaagaaagt 441
Query: 242 gccatgtttcccagaacatgaatgttatatctgaaatgatggtggcctgcttggggaaaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gccatgtttcccagaacatgaatgttatatctgaaatgatggtggcctgcttggggaaaa 501
Query: 302 attactttgactctctgtaactttgtgaaccttggagacatttcccggcctcttgctttg 361
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 502 attactttgactctctgtaactttgtgaaccttggagacatttcctggcctcttgctttg 561
Query: 362 ttcctag 368
|||||||
Sbjct: 562 ttcctag 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no074_n08.g1 MSMg01no074_n08.g1 CHROMAT_FILE:
MSMg01no074_n08.g1 PHD_FILE: MSMg01no074_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:20 2005
(233 letters)
>mm_chr14_25206597_25207229
Length = 633
Score = 408 bits (211), Expect = e-118
Identities = 226/231 (97%)
Strand = Plus / Plus
Query: 1 aggattactctcttctgattttgctgttctctttgctttgggtcttctgagtgtagctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aggattactctcttctgattttgctgttctctttgctttgggtcttctgagtgtatctgt 260
Query: 61 catggctgtattcatctcttccttaggtcttcattggaacctaggtcctgttggggttac 120
||||||||||||| |||||| ||||||||||||| ||||||| |||||||||||||||||
Sbjct: 261 catggctgtattcgtctctttcttaggtcttcatgggaacctgggtcctgttggggttac 320
Query: 121 tggggccctgaagaagggctggcaggaggagactgccaggggcttactgtgtggaggtcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggggccctgaagaagggctggcaggaggagactgccaggggcttactgtgtggaggtcg 380
Query: 181 tttccagaaacctgttcttcaggtgaagaacaacttggaaatactgaggga 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttccagaaacctgttcttcaggtgaagaacaacttggaaatactgaggga 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
