Query= MSMg01no075_d19.b1 MSMg01no075_d19.b1 CHROMAT_FILE:
MSMg01no075_d19.b1 PHD_FILE: MSMg01no075_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:51 2005
(630 letters)
>mm_chr14_112716425_112717453
Length = 1029
Score = 1151 bits (595), Expect = 0.0
Identities = 619/627 (98%), Gaps = 2/627 (0%)
Strand = Plus / Minus
Query: 5 ggaattctgtttg-ttctttttcttagttaattcaacaacatatgacattacattaaaga 63
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ggaattctgtttgctaatttttcttagttaattcaacaacatatgacattacattaaaga 740
Query: 64 ataattagtttctatttgaagattacatagatgcttcccaaacacacagttaaatggaat 123
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 739 ataattagtttctatttgaagattacatagatgcttcccaaacatacagttaaatggaat 680
Query: 124 tcagttttcttgctttttttctttgttttttcataacttttattattaatcagtttaata 183
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tcagttttcttgc-ttttttctttgttttttcataacttttattattaatcagtttaata 621
Query: 184 atgaggtatcatcatatctcacacaatccaaccacagtgaatctcttgcttcctgtcaaa 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atgaggtatcatcatatctcacacaatccaaccacagtgaatctcttgcttcctgtcaaa 561
Query: 244 atcgtagcctcttttctattaatcattaatgttacgaaaacacacatatatatgtgtgta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atcgtagcctcttttctattaatcattaatgttacgaaaacacacatatatatgtgtgta 501
Query: 304 ttctcatgcctatacacatgtaggaaagaagaggatatataaatagtcatctacagaaac 363
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ttctcatgcctatacacacgtaggaaagaagaggatatataaatagtcatctacagaaat 441
Query: 364 gaataaatacacaaatacaacctgctgagtcagtttctaattcagtttcacagtaataaa 423
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gaataaatacataaatacaacctgctgagtcagtttctaattcagtttcacagtaataaa 381
Query: 424 ccatgagaaacaaagaaattctataattccacactcaggcaagtattaggcaatgcttta 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ccatgagaaacaaagaaattctataattccacactcaggcaagtattaggcaatgcttta 321
Query: 484 tttatattaatttgattataacattttagaaaataattttgtatgtattaattcaactag 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttatattaatttgattataacattttagaaaataattttgtatgtattaattcaactag 261
Query: 544 ctcaatttatatgaaatcattacaatattatttataattgctgcaggcattttcagtgaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 ctcaatttatatgaaatcattacaatattatttataattgctgcaggcattttcagtgaa 201
Query: 604 tttctttactttgtttctctagttaaa 630
|||||||||||||||||||||||||||
Sbjct: 200 tttctttactttgtttctctagttaaa 174
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1029
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1019
Effective search space: 631780
Effective search space used: 631780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_d19.g1 MSMg01no075_d19.g1 CHROMAT_FILE:
MSMg01no075_d19.g1 PHD_FILE: MSMg01no075_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:51 2005
(579 letters)
>mm_chr14_112540119_112541097
Length = 979
Score = 1021 bits (528), Expect = 0.0
Identities = 567/580 (97%), Gaps = 2/580 (0%)
Strand = Plus / Plus
Query: 1 cagacttctattttagtaaatattattataaatataatttcttacattgaaatttgagat 60
|||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaattctattatagtaaatattattataaatataatttcttacattgaaatttgagat 260
Query: 61 atttaaaaaacctaaaaaccaaccaactatgattttaaattatttaacacctttaaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttaaaaaacctaaaaaccaaccaactatgattttaaattatttaacacctttaaaaga 320
Query: 121 tgttaagcaaaaataacactgatatttttacacattaaatttagtgtttattatcatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgttaagcaaaaataacactgatatttttacacattaaatttagtgtttattatcatgtg 380
Query: 181 ttacatgtgttcagagagtagaggaatgaatgtcgtaaacagaaatgacaagcataatag 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 ttacatgtgttcagagagtagaggcatgaatgtcgtaaacagaaatgacaagcataatag 440
Query: 241 agaagcaagaaatggcaaacattaaccagctatgaattttgtcaattcaatgtactagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaagcaagaaatggcaaacattaaccagctatgaattttgtcaattcaatgtactagaa 500
Query: 301 agaataatataattttacaaaatatattaagaacaagaaagaacaccacatgttttgtgt 360
|||||||||||||||||||||| ||||||||||||||| |||| | | |||||||||||
Sbjct: 501 agaataatataattttacaaaacatattaagaacaagacagaataaaatatgttttgtgt 560
Query: 361 tttatgtgaaattgttggaagatattttatgaaaatgaagactttttaaatattaaatgt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttatgtgaaattgttggaagatattttatgaaaatgaagactttttaaatattaaatgt 620
Query: 421 aatataaatgtcatgtggtataatgttgatttcaggataatcagtatttttgagaactat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aatataaatgtcatgtggtataatgttgatttcaggataatcagtatttttgagaactat 680
Query: 481 agatcttaggtaaga-taaaaagaataagaacaatgaaagacaacagtgaatataaaggt 539
|||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 681 agatcttaggtaagtgtaaaa-gagtaagaacaatgaaagacaacagtgaatataaaggt 739
Query: 540 tattaatgatatatcctataattagtgcaaaactgtacaa 579
||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tattaatgatatatcctataattagtgcaaaactgtacaa 779
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
