CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATTGTCATATTCCTTCTCCTAGTCTGTGTCTTTTTATTGGATAAT
TGAAACCATTGATGTTGAGAGATATCAATGAGCTGTGCTTGTTGATTCCA
ATTATTTTCTTGTGATTGTCCCTGTGTGTTTGAGTGTGTGCAAGTGTGTT
TCTTCTTTTGAATTTGCTGTTCTGGGATTATTCATTAACTTTAGGTTTTA
TTTTTTAATATGTTTAATGTTTTGCATGGCATATTTCCCTCTAGGACGTT
CTGTAGGGCCCTACCTGTAAATGTATATTGCTTATATGTGGTTTTACCAT
GGAATGCTTTATTTTCTCCATCTATTGTGTCTGAAAGTTTTATTGGGTAC
AGTCATCTGGGCCAGCATTTGTGATCTCTTAGAGTCTATAGAACACTTGG
AATTTAGATTTTCCATTCAAAAGTCAGATGTTCTTCTAATAAGCCTGTCT
TTATATCTCCCTTGGTCTGTTTCCCCTGTAGCTTTTAATATTCTTTCTTT
GATCTGTACTTTTAGTTTTAACTATTGTGCTTTAAGGTCCTTTCTTTTGT
GGTTCGGCCATTTGATATGGCCTACCCTGGCACTTCAAGTCACTGTGACA
GGTGCTTTTGAGAAATAACATTTTATTTCATCAAGTAATCCATTTCTGTA
AACTTGAGATTCN

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAAGGGGATTCTAGTACCTAGTTTTAAAAT
TGTATTATTTAGCTGAGTGTTGTGGTATATGGCTATAGCCATAGCACATG
GGAGGTAGAGGCAAGGAGCTCAGAAGTTTAAGTCTAGTCTAAGATTTTCA
GAAAATTTGAGTTCAGTTTGTGCTATCAGATTTCCATGTTGAAACAAAAA
CTGGAGGGAAAATGATAGAATTTGCAGTATGTAACTGGTGAGGAGGGCAT
TTCCCACTTGTAATGTCAGTACTGTGACCATGAAGACGGGAGGAGGGGCT
CAAGGTCAACCTATGCTAACTGCTGAGATTTATTTTTTTGTCTCAAGGCA
AATGATATAAAACATAAAGTGTATGTGGTAGAAAAATTAACATTCTTTTT
AGGTGTGACATCACCTCTTCAAACAGAATGGGACTACAGTAACAAAATGC
ATTGGGAAAACTAGAGATAAGAAATATGGTTAAACTTTATATACTTGCAT
TATGTTGCATTGATTTTCTATGCCTCAGCCTGTTTGCTGATCTTTAGTAA
CCCAATTTAACCTTTATGCTTTGACTTTTGTTTTATTGTCTGCAGCAGAA
TTTTCAACCTTTGTACAGATTGGTTCATAAGTTCCTTTCCTCATAAAAAT
ACTTTCATCATTCATGT

Query= MSMg01no075_e17.g1 MSMg01no075_e17.g1 CHROMAT_FILE:
MSMg01no075_e17.g1 PHD_FILE: MSMg01no075_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:55 2005
         (646 letters)



>mm_chr14_90103330_90104375
          Length = 1046

 Score = 1249 bits (646), Expect = 0.0
 Identities = 646/646 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    aaggggattctagtacctagttttaaaattgtattatttagctgagtgttgtggtatatg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 aaggggattctagtacctagttttaaaattgtattatttagctgagtgttgtggtatatg 941

                                                                        
Query: 61   gctatagccatagcacatgggaggtagaggcaaggagctcagaagtttaagtctagtcta 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940  gctatagccatagcacatgggaggtagaggcaaggagctcagaagtttaagtctagtcta 881

                                                                        
Query: 121  agattttcagaaaatttgagttcagtttgtgctatcagatttccatgttgaaacaaaaac 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880  agattttcagaaaatttgagttcagtttgtgctatcagatttccatgttgaaacaaaaac 821

                                                                        
Query: 181  tggagggaaaatgatagaatttgcagtatgtaactggtgaggagggcatttcccacttgt 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820  tggagggaaaatgatagaatttgcagtatgtaactggtgaggagggcatttcccacttgt 761

                                                                        
Query: 241  aatgtcagtactgtgaccatgaagacgggaggaggggctcaaggtcaacctatgctaact 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760  aatgtcagtactgtgaccatgaagacgggaggaggggctcaaggtcaacctatgctaact 701

                                                                        
Query: 301  gctgagatttatttttttgtctcaaggcaaatgatataaaacataaagtgtatgtggtag 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700  gctgagatttatttttttgtctcaaggcaaatgatataaaacataaagtgtatgtggtag 641

                                                                        
Query: 361  aaaaattaacattctttttaggtgtgacatcacctcttcaaacagaatgggactacagta 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640  aaaaattaacattctttttaggtgtgacatcacctcttcaaacagaatgggactacagta 581

                                                                        
Query: 421  acaaaatgcattgggaaaactagagataagaaatatggttaaactttatatacttgcatt 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580  acaaaatgcattgggaaaactagagataagaaatatggttaaactttatatacttgcatt 521

                                                                        
Query: 481  atgttgcattgattttctatgcctcagcctgtttgctgatctttagtaacccaatttaac 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520  atgttgcattgattttctatgcctcagcctgtttgctgatctttagtaacccaatttaac 461

                                                                        
Query: 541  ctttatgctttgacttttgttttattgtctgcagcagaattttcaacctttgtacagatt 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460  ctttatgctttgacttttgttttattgtctgcagcagaattttcaacctttgtacagatt 401

                                                          
Query: 601  ggttcataagttcctttcctcataaaaatactttcatcattcatgt 646
            ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400  ggttcataagttcctttcctcataaaaatactttcatcattcatgt 355


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space:   658896
Effective search space used:   658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)