Query= MSMg01no079_c10.b1 MSMg01no079_c10.b1 CHROMAT_FILE:
MSMg01no079_c10.b1 PHD_FILE: MSMg01no079_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:42 2005
(649 letters)
>mm_chr14_62151982_62153030
Length = 1049
Score = 1197 bits (619), Expect = 0.0
Identities = 640/647 (98%), Gaps = 2/647 (0%)
Strand = Plus / Plus
Query: 5 gaattctcttttcc-catagatctatccagctagcctcctctgtattttgagacaaggaa 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctcttttccacatagatctatccagctagcctcctctgtattttgagacaaggaa 262
Query: 64 cattacagtacatagtctagtctggccttaaatttgtgagcctccttacctgatttctca 123
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 263 cattacagtacatagtctagtctggccttaaatttgtgagcctccttccctgatctctca 322
Query: 124 agtgctaggttactgtcttgtgccaccacacccagttaaacatgttgtgaatcaaaatta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agtgctaggttactgtcttgtgccaccacacccagttaaacatgttgtgaatcaaaatta 382
Query: 184 ctaaaatagaaagtcagatgaaagtcaataaataacatatatagtctgaattctatatat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctaaaatagaaagtcagatgaaagtcaataaataacatatatagtctgaattctatatat 442
Query: 244 cttcagaggtaaaatgtgggtttatgtaaatatgtttgcgaagcacataaccaaatgtag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cttcagaggtaaaatgtgggtttatgtaaatatgtttgcgaagcacataaccaaatgtag 502
Query: 304 tctactaaataacacataagcattgtgcagaactccatagcttctggaattaaaaccagc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tctactaaataacacataagcattgtgcagaactccatagcttctggaattaaaaccagc 562
Query: 364 ctgccttaaatctcaagacattttacctgcttagtctagtatgcacagggtccagaatgc 423
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 563 ctgccttaaatctcgagacattttacctgcttagtctagtatgcacagggtccagaatac 622
Query: 424 acccctgacctgagtctctactgcataagtctgggctgggtccaagaatgtcccctattc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 acccctgacctgagtctctactgcataagtctgggctgggtccaagaatgtcccctattc 682
Query: 484 taaagagttccc-agtgatcctgctggtctaagacaccatgaaaaccactgcttcacaat 542
|||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 683 taaagagttccccagtgatcctgctggtctaagacaccatgaaaatcactgcttcacaat 742
Query: 543 aatcatggctatttttattaagtgctgataattaaagcattttacacacaccatcaacta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aatcatggctatttttattaagtgctgataattaaagcattttacacacaccatcaacta 802
Query: 603 gtcacaggctctcagcatgtcagtatgattaccctttgtgtaaggta 649
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gtcacaggctctcagcatgtcagtatgattaccctttgtgtaaggta 849
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1049
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1039
Effective search space: 663921
Effective search space used: 663921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_c10.g1 MSMg01no079_c10.g1 CHROMAT_FILE:
MSMg01no079_c10.g1 PHD_FILE: MSMg01no079_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:42 2005
(528 letters)
>mm_chr14_62270824_62271751
Length = 928
Score = 702 bits (363), Expect = 0.0
Identities = 379/385 (98%), Gaps = 3/385 (0%)
Strand = Plus / Minus
Query: 1 aaatgtactcatatagatactgaatagtaagcagggaaccagaagggctttgtttacagg 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaatgtactcatatagattctgaatagtaagcagggaaccagaagggctttgtttacagg 327
Query: 61 agagtactataggctgaaactgaagaggggctgtggatttgtccaatcatcttgcatcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agagtactataggctgaaactgaagaggggctgtggatttgtccaatcatcttgcatcca 267
Query: 121 tcatataaactgtacaagcaattatgaatgctgaacataaaaggaacttctgatgagtgg 180
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tcatataaactatataagcaattatgaatgctgaacataaaaggaacttctgatgagtgg 207
Query: 181 gatataatgtccccacaaactgctgtctatttccaggaatgaaaaaaagagtaactatac 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 206 gatataatgtccccacaaactgctgtctatttccaggaatg-aaaaaagagtaactatac 148
Query: 241 agtggtcacacattgacaaggggatcaaaattatgatcatcagtgagtaatatatgggtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 agtggtcacacattgacaaggggatcaaaattatgatcatcagtgagtaatatatgggtg 88
Query: 301 tcatgttctacaagtgacactctgagggacaggcaacagagtctgtgcagta--gaaggc 358
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 87 tcatgttctacaagtgacactctgagggacaggcaacagagtctgtgcagtactgaaggc 28
Query: 359 tgaaatgcatagtctccatctaact 383
|||||||||||||||||||||||||
Sbjct: 27 tgaaatgcatagtctccatctaact 3
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
