Query= MSMg01no079_f06.b1 MSMg01no079_f06.b1 CHROMAT_FILE:
MSMg01no079_f06.b1 PHD_FILE: MSMg01no079_f06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:56 2005
(657 letters)
>mm_chr14_78863544_78864601
Length = 1058
Score = 1187 bits (614), Expect = 0.0
Identities = 645/656 (98%), Gaps = 5/656 (0%)
Strand = Plus / Plus
Query: 5 gaattcacaatatatgcaatatattaagtgatgcacaaacttcaataattcagacccact 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaatataagcaatatattaagtgatgcacaaacttcaataattcagacccact 264
Query: 65 cataggataacagagagcacccctgtacctccccccccatctgattattaaataatatcc 124
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 265 cataggataacagagagcacccctgtacct-cccccccatctgattattaaataatatcc 323
Query: 125 ttagaggctaacttctgaagttatctctgtgatgtcacataccacacactaactggggac 184
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttggaggctaacttctgaagttatctctgtgatgtcacataccacacactaactggggac 383
Query: 185 acctg-aaaaaaaaaactccaattatatttaagaaatctgtttcctgtaagtgaaacaaa 243
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 acctgaaaaaaaaaaactccaattatatttaagaaatctgtttcctgtaagtgaaacaaa 443
Query: 244 agttatttgttttgtaaactgtggagggggggggaaagacccataagcttctacgaggcc 303
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 444 agttatttgttttgtaaactgtgga-gggggggaaaagacccataagcttctacgaggcc 502
Query: 304 ctttcagaactacaaattccaagtgaatccaaataaattaatttggaaagccccttgaat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ctttcagaactacaaattccaagtgaatccaaataaattaatttggaaagccccttgaat 562
Query: 364 tctttggactggaattaaacttgagggtcatctttcaaagtcttgccttgccaacgacca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tctttggactggaattaaacttgagggtcatctttcaaagtcttgccttgccaacgacca 622
Query: 424 atattttatggtgacattttcctaaacagtttgcgcaaggaaaggacagtgtaatcaaag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atattttatggtgacattttcctaaacagtttgcgcaaggaaaggacagtgtaatcaaag 682
Query: 484 acactaagtaagtaataagcaaacagatgtgtttaagatagcattttaaaaaaaaa--gt 541
||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct: 683 acactaaataagtaataagcaaacagatgtgtttaagatagcatttaaaaaaaaaaaagt 742
Query: 542 accagcatatttttaaggaaacaaatacagtagacgcctcatgtgttcaacaatattaag 601
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 743 accagcatatttttaaggaaacaaatacagtagacgcctcatgtgttcaacactattaag 802
Query: 602 caatggccttgtctatacaaggacattttccagatagcagctgatttaacatgaca 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 caatggccttgtctatacaaggacattttccagatagcagctgatttaacatgaca 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1058
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1048
Effective search space: 678056
Effective search space used: 678056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_f06.g1 MSMg01no079_f06.g1 CHROMAT_FILE:
MSMg01no079_f06.g1 PHD_FILE: MSMg01no079_f06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:27:56 2005
(596 letters)
>mm_chr14_79002193_79003188
Length = 996
Score = 1122 bits (580), Expect = 0.0
Identities = 592/596 (99%)
Strand = Plus / Minus
Query: 1 attttatttccacttacgcaagtctgtttcccttcttactacttaaagttatggatgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 attttatttccacttacgcaagtctgtttcccttcttactacttaaagttatggatgagc 737
Query: 61 cagcagtgcagccctctgagccagtcagtccgtcttgtgactatgatacagaaacagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 cagcagtgcagccctctgagccagtcagtccgtcttgtgactatgatacagaaacagatg 677
Query: 121 aagctaaagaggacgacgcgaaagagtcgctatcaggtgagaagtcaatgatgacgtcat 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 676 aagctaaagaggacgacgcgaaagagtcgctatcaggtgagaagtcgatgatgacgtcat 617
Query: 181 caggaaagctcagttacaactggctttgcatttatttaattttaagtatgaaatgaactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 616 caggaaagctcagttacaactggctttgcatttatttaattttaagtatgaaacgaactg 557
Query: 241 ttgaatttctatttttctaaaggcctttgggcagtttgtgttattcatgaacactaaaat 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 556 ttgaatttctatttttctaaaggcctttgggcagtctgtgttattcatgaacactaaaat 497
Query: 301 aataatggcaacgtatgagttaggttgacaagtattcttatatctcttgtgagatctaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aataatggcaacgtatgagttaggttgacaagtattcttatatctcttgtgagatctaag 437
Query: 361 agatatctagagaccaacaataaactaagtgttatgggatgattgagtgtcttagaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agatatctagagaccaacaataaactaagtgttatgggatgattgagtgtcttagaagaa 377
Query: 421 atagccaggtttccccactttagcgtgggttgctctcagatttcttgggaaactgcgaga 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 376 atagccaggtttccccactttagcatgggttgctctcagatttcttgggaaactgcgaga 317
Query: 481 aagctgctggcctttgctgcatcaagcttggcctttgacggattcagcagagctttatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aagctgctggcctttgctgcatcaagcttggcctttgacggattcagcagagctttatat 257
Query: 541 tctgctgattgaccaatgcttgttgcgaagctaagctttaaaaccaaaagccttct 596
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tctgctgattgaccaatgcttgttgcgaagctaagctttaaaaccaaaagccttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 996
Length adjustment: 10
Effective length of query: 586
Effective length of database: 986
Effective search space: 577796
Effective search space used: 577796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
