ATAATTTGCGCCGCTATACGACTCCTATATCGAGAGATCCGCGGAATTCA
CACCCTTCTCGAATTCCAGTTCCTGAGGATTCTTGCCCTATTCTGCACCC
TGTGGGTACCTGAGCTAACATGCAAACAGATACACAAATAATTTTGAACA
ATGATAAAAATAACTTACAAATTTACATGTAGTATTTCTTATAAAGTTGA
TTTAATGAAATTTATTAATTCTGAAATTAATAAAAATACAATTACCGAGA
TATATTGCTGAATATGGTAATTTCAGTTACATGTATCTGTATTCTTCAAA
AGTGTATGTCTCTCTATATGAAGAAACAAAAACTAATTGCACAGCAGCAT
GCACATTCGCAACAGCTGGAGTGTGTTGATATAAAGAATAGAAAATTTAG
ATATGAAATATGTAATTCTTTTTCAGTAAACGAGTCTTTGCTCTGTGGGC
ATCCACCTGACAGATAAAGTCCATACAAATTGAGGAAAACAGAATATATT
GATTATAAGTACTTTGAAAATACATTCATAGAAATATCTAGACTCCTTTG
AGCAAACAGGGATATCAAACGCTAAGCAAGTTGATACTTAAAGTTCATTA
TCACACAGACTAGCCAGGTATATCAGGATGCTATAGATTGTGGAACGGAT
TGCAACATACAGGGAAAAGAAGTAAACATGCTAAGAAATGGCAAGACC

ATGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCAGAGAAG
CACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAA
AACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAA
ATTAAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTC
CTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAATCAGTC
TGGCGGTTCCTCAGAAAATTGGACATAGTACTACCAGAGGATCCAGCAAT
ACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACA
CATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGG
AAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTA
CATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGA
AATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTA
ACACATTCACAAAGAAACTCACACAATATGTACTCACTGATAAGTGGATA
TTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTAAACA
T

Query= MSMg01no079_h02.b1 MSMg01no079_h02.b1 CHROMAT_FILE:
MSMg01no079_h02.b1 PHD_FILE: MSMg01no079_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:04 2005
         (657 letters)



>mm_chr14_106906663_106907719
          Length = 1057

 Score = 1087 bits (562), Expect = 0.0
 Identities = 574/578 (99%), Gaps = 2/578 (0%)
 Strand = Plus / Minus

                                                                       
Query: 6   gaattcacacccttctcg-aattccagttcctgaggattcttgccctattctgcaccctg 64
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gaattcacacccttct-gtaattccagttcctgaggattcttgccctattctgcaccctg 519

                                                                       
Query: 65  tgggtacctgagctaacatgcaaacagatacacaaataattttgaacaatgataaaaata 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 tgggtacctgagctaacatgcaaacagatacacaaataattttgaacaatgataaaaata 459

                                                                       
Query: 125 acttacaaatttacatgtagtatttcttataaagttgatttaatgaaatttattaattct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 acttacaaatttacatgtagtatttcttataaagttgatttaatgaaatttattaattct 399

                                                                       
Query: 185 gaaattaataaaaatacaattaccgagatatattgctgaatatggtaatttcagttacat 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gaaattaataaaaatacaattaccgagatatattgctgaatatggtaatttcagttacat 339

                                                                       
Query: 245 gtatctgtattcttcaaaagtgtatgtctctctatatgaagaaacaaaaactaattgcac 304
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gtatctgtattcttcgaaagtgtatgtctctctatatgaagaaacaaaaactaattgcac 279

                                                                       
Query: 305 agcagcatgcacattcgcaacagctggagtgtgttgatataaagaatagaaaatttagat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agcagcatgcacattcgcaacagctggagtgtgttgatataaagaatagaaaatttagat 219

                                                                       
Query: 365 atgaaatatgtaattctttttcagtaaacgagtctttgctctgtgggcatccacctgaca 424
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 218 atgaaatatgtaattctttttcagtaaatgagtctttgctctgtgggcatccacctgaca 159

                                                                       
Query: 425 gataaagtccatacaaattgaggaaaacagaatatattgattataagtactttgaaaata 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gataaagtccatacaaattgaggaaaacagaatatattgattataagtactttgaaaata 99

                                                                       
Query: 485 cattcatagaaatatctagactcctttgagcaaacagggatatcaaacgctaagcaagtt 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  cattcatagaaatatctagactcctttgagcaaacagggatatcaaacgctaagcaagtt 39

                                                 
Query: 545 gatacttaaagttcattatcacacagactagccaggta 582
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 38  gatacttaaagttcattatcacacagactagccaggta 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)