Query= MSMg01no079_k17.b1 MSMg01no079_k17.b1 CHROMAT_FILE:
MSMg01no079_k17.b1 PHD_FILE: MSMg01no079_k17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:21 2005
(491 letters)
>mm_chr14_102188171_102189065
Length = 895
Score = 857 bits (443), Expect = 0.0
Identities = 477/491 (97%), Gaps = 7/491 (1%)
Strand = Plus / Minus
Query: 7 gaattctttttg-acacttgatccttctctaagtattctatgactattagaaaaggcagt 65
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 gaattctttttgaatacttgatccttctctaagtattctatgactattagaaaaggcagt 821
Query: 66 ggacgtgcacacctttaatcccagtactcgggaggcagaagcaggtggatctccaaattc 125
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 820 ggacgtgcacacctttaatcccagtactcgggaggcagaagcaggtggatctccaagttc 761
Query: 126 aaggtcagcttggtatacacagtttcaggacagccaggactacatagagaaaccctgtct 185
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 760 aaggtcagcttggtgtacacagtttcaggacagccaggactacatagagaaaccctgcct 701
Query: 186 caaaagcccccaaaaaatggaaaaagaaggaaggaaagaaagcttgc-----atactata 240
||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct: 700 caaaagcccccaaaaaatggaaaaagaaggaaggaaagaaagcttgcattatata-tata 642
Query: 241 tatatatatatagtactggttaccctatctcagaaaccctaagaaaactgattgagtttt 300
|||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 641 tatatatatatattactggttaccctatctcagaaacccaaagaaaactgattgagtttt 582
Query: 301 aaaacagcaatttgtacaaccatataaaagtaaagtcagctataaccctgcctaaagaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aaaacagcaatttgtacaaccatataaaagtaaagtcagctataaccctgcctaaagaac 522
Query: 361 taaagcaaaatgatacaaaactctgcgagttttataacaaaggaaagcagatattttcag 420
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 521 taaagcaaaatgatacaaaactctgcgagttttaaaacaaaggaaagcagatattttcag 462
Query: 421 taagaatttctttcaatacaagagaccacctgagctgcattccttaaagtcactttccaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 taagaatttctttcaatacaagagaccacctgagctgcattccttaaagtcactttccaa 402
Query: 481 catctccaggt 491
|||||||||||
Sbjct: 401 catctccaggt 391
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 491
Length of database: 895
Length adjustment: 10
Effective length of query: 481
Effective length of database: 885
Effective search space: 425685
Effective search space used: 425685
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no079_k17.g1 MSMg01no079_k17.g1 CHROMAT_FILE:
MSMg01no079_k17.g1 PHD_FILE: MSMg01no079_k17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:21 2005
(434 letters)
>mm_chr14_102021868_102022702
Length = 835
Score = 775 bits (401), Expect = 0.0
Identities = 425/433 (98%), Gaps = 1/433 (0%)
Strand = Plus / Plus
Query: 3 aaaataagtggccaatttgaaaacagagaattgtagaggggttagaatttgatagcctgg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aaaataagtggccaatttgaaaacagagaattgtagaggggttagaatttgatagcctgg 262
Query: 63 gagagaaaaccttcatgtttccaaattctcatgcaaataaaagattctcaatttagggaa 122
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gggagaaaaccttcatgtttccaaattctcatgcaaataaaagattctcaatttagggaa 322
Query: 123 tggcattagagggctgcacagagacgcggaggacagagcactcactgcacaagctgaagg 182
|||||||||||||||||| |||||| | | |||||||||||||||||||||| ||| |||
Sbjct: 323 tggcattagagggctgcagagagactccgtggacagagcactcactgcacaaactggagg 382
Query: 183 accagaacccaggcactaatgccaga-ctctagaggtgacgaaagggggtccctgggaca 241
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 383 accagaacccaggcactaatgccagaactctagaggtgacgaaagggggtccctgggaca 442
Query: 242 agcttgctgactagactacctgagtcatcaaccctggtgcagacacagacttgcctcagt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 agcttgctgactagactacctgagtcatcaaccctggtgcagacacagacttgcctcagt 502
Query: 302 gaatgaagaagacggagatcaaggaggatgcctgaaatcgacttctagcctccaaatgca 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gaatgaagaagacggagatcaaggaggatgcctgaaatcgacttctagcctccaaatgca 562
Query: 362 tttgcacacacatacacatgtacccacacatgcaacatgcatatatgtgaatgtacacca 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 tttgcacacacatacacatgtacccacacatgcaacatgcatatatgtgaatgtacacca 622
Query: 422 cacacacacacac 434
|||||||||||||
Sbjct: 623 cacacacacacac 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 835
Length adjustment: 9
Effective length of query: 425
Effective length of database: 826
Effective search space: 351050
Effective search space used: 351050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
