Query= MSMg01no080_o18.b1 MSMg01no080_o18.b1 CHROMAT_FILE:
MSMg01no080_o18.b1 PHD_FILE: MSMg01no080_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:58 2005
(371 letters)
>mm_chr14_120510241_120511010
Length = 770
Score = 611 bits (316), Expect = e-179
Identities = 358/382 (93%), Gaps = 17/382 (4%)
Strand = Plus / Plus
Query: 6 gaattcatctgtggacccacccacgtatttcccacttcctctgctttgtatctcttttta 65
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcatctgtggagttacccacgtatttcccacttcctctgctttgtatctcttttta 265
Query: 66 caattcagctcttccatctggaatctttttcttctacaaaaaggacaaattttatcatgg 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 caattcagctcttccatctggaatctttttcttctacaaaaaggacaaattttatcatgg 325
Query: 126 ccccctaatggtactttaatgtgtcttaaaacttgtttcatctgagtcgtagaaaatatt 185
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 326 ccccctaatggtactttaatgtgtcttaaaacttgtttcatctgaatcgtagaaaatatt 385
Query: 186 tcagtggatgaacgaattttaacttgagagttatttccttcgtgtatatagaagatagac 245
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tcagtggatgaa-gaattttaacttgagagttatttccttcgtgtatatagaagatagac 444
Query: 246 aacattctacaaactgtttctccctccttccctctgtgtatccctccctcagtctgccca 305
||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 445 aacattctacaaactgtttctccctccttccctctgtctatccctccctcagtctgtcca 504
Query: 306 tccatctgtccctccctcttcccctccctccctccctc----------------cctcct 349
|||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 505 tccatctgtccctccctcttcccctccctccctccctctctccagccctccctccctcct 564
Query: 350 atcctccctttttcccaatgct 371
| ||||||||||||||||||||
Sbjct: 565 accctccctttttcccaatgct 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 770
Length adjustment: 9
Effective length of query: 362
Effective length of database: 761
Effective search space: 275482
Effective search space used: 275482
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_o18.g1 MSMg01no080_o18.g1 CHROMAT_FILE:
MSMg01no080_o18.g1 PHD_FILE: MSMg01no080_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:58 2005
(405 letters)
>mm_chr14_120675433_120676237
Length = 805
Score = 752 bits (389), Expect = 0.0
Identities = 401/405 (99%)
Strand = Plus / Minus
Query: 1 tttaacacagagaaagccttcccttctcctgggccaagtgtgttaaaaacaaatctgctt 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 605 tttaacacagagaaagccttcccttctcctgggccaagtgtgttaaaaataaatctgctt 546
Query: 61 caccctttccagccgctgcttctcggcaagaaagttgatctggctgggcatagtgagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 caccctttccagccgctgcttctcggcaagaaagttgatctggctgggcatagtgagagc 486
Query: 121 ccagctttaaaagctagcctgctctcattaaattattctgctggctgtgtgttctcatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ccagctttaaaagctagcctgctctcattaaattattctgctggctgtgtgttctcatta 426
Query: 181 aaaatgcatacagatcagataattgcagtaagcattattaacccagccttacttttgaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aaaatgcatacagatcagataattgcagtaagcattattaacccagccttacttttgaat 366
Query: 241 ataatggttccacttttaagctggaaacaaagacagaggctgccaggaaaagcaatgtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ataatggttccacttttaagctggaaacaaagacagaggctgccaggaaaagcaatgtaa 306
Query: 301 acattgaaccacagtgtctaagactagccaggaagcttcctcccctgccctggtgctgct 360
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 305 acattgaaccacagtgtctaagactagccaggaagcttcctcttctgccctggtgctgct 246
Query: 361 taaaatgcgcttttgaaactcaattaaagccattgccctgtagca 405
||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 245 taaaatgtgcttttgaaactcaattaaagccattgccctgtagca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 405
Length of database: 805
Length adjustment: 9
Effective length of query: 396
Effective length of database: 796
Effective search space: 315216
Effective search space used: 315216
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
