Query= MSMg01no081_a02.b1 MSMg01no081_a02.b1 CHROMAT_FILE:
MSMg01no081_a02.b1 PHD_FILE: MSMg01no081_a02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:04 2005
(320 letters)
>mm_chr14_109861746_109862465
Length = 720
Score = 619 bits (320), Expect = 0.0
Identities = 320/320 (100%)
Strand = Plus / Minus
Query: 1 ctaatcatgtatgtacatttttccttgtaactacatataaaaattattctcttactcata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 ctaatcatgtatgtacatttttccttgtaactacatataaaaattattctcttactcata 461
Query: 61 atgccaaagacagtattgcagtatttgaaattattgaaaaaatgctaacgtatagtgaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 atgccaaagacagtattgcagtatttgaaattattgaaaaaatgctaacgtatagtgaca 401
Query: 121 atcagtgacacatcatagtgaagtttccaggtaggaagttaaaagcacagattaatggac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 atcagtgacacatcatagtgaagtttccaggtaggaagttaaaagcacagattaatggac 341
Query: 181 actgaaacggggagttatgagactatttcactaaatccaatataagagaccaaaatcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 actgaaacggggagttatgagactatttcactaaatccaatataagagaccaaaatcaaa 281
Query: 241 gacttaagaacaatgtttttgctcttgctgttgaaaatgctatcattgtctcacaaacat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 gacttaagaacaatgtttttgctcttgctgttgaaaatgctatcattgtctcacaaacat 221
Query: 301 tcaattaacagcacggaggc 320
||||||||||||||||||||
Sbjct: 220 tcaattaacagcacggaggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_a02.g1 MSMg01no081_a02.g1 CHROMAT_FILE:
MSMg01no081_a02.g1 PHD_FILE: MSMg01no081_a02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:04 2005
(460 letters)
>mm_chr14_109765815_109766674
Length = 860
Score = 812 bits (420), Expect = 0.0
Identities = 454/474 (95%), Gaps = 14/474 (2%)
Strand = Plus / Plus
Query: 1 tttgtttagctctgagccctattttttaaacatcaccagttttacatattacatactatt 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtttagttctgagccctattttttaaacatcaccagttttacatattacatactatt 260
Query: 61 ggatttcttcatgagaaaatgcatttagaccatacatttcaaccatttgatgtgttccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggatttcttcatgagaaaatgcatttagaccatacatttcaaccatttgatgtgttccaa 320
Query: 121 tttttttctttatgcatattcatctttatgttcatccttttcatttttatattttatatt 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttttccttatgcatattcatctttatgttcatccttttcatttttatattttatatt 380
Query: 181 aggctttctttgaatcttccaattcaaaatcaatctttagtctttgagatgaacatttgt 240
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggccttctttgaatcttccaattcaaaatcaatctttagtctttgagatgaacatttgt 440
Query: 241 ctttgttttggaggtgaagaaaatcgattcttccaaacagcaggtatttttagttttctt 300
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 441 ctttgttttggaggtgaagaaaatctattcttccaaacagcaggtatttttagttttctt 500
Query: 301 tccaaaaccgttgactgaaagattgtaaactcaaggtcaataaaacatgtgtttccttta 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 501 tccaaaaccgttgactgaaagattgtaaactcaaggtcaataaaagatgtgtttccttta 560
Query: 361 taacatagtactattgaagaaaccaggtaatatgaactacacggtatacttgatctctct 420
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taagatagtactattgaagaaaccaggtaatatgaactacacggtatacttgatctctct 620
Query: 421 ct--------------ttctctctctctcttatttatttatgatcttcattcta 460
|| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctctctctctctctctttctctctctctcttatttatttatgatcttcattcta 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
