Query= MSMg01no081_d23.b1 MSMg01no081_d23.b1 CHROMAT_FILE:
MSMg01no081_d23.b1 PHD_FILE: MSMg01no081_d23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:23 2005
(448 letters)
>mm_chr14_85267906_85268753
Length = 848
Score = 797 bits (412), Expect = 0.0
Identities = 435/443 (98%), Gaps = 2/443 (0%)
Strand = Plus / Plus
Query: 7 gaattcctaaggtactatcatg-aaaaaatatgaaactcaactagatttcaaattctgga 65
|||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattcctaaggtactatt-tgcaaaaaatatgaaactcaactagatttcaaattctgga 265
Query: 66 aaatcatcttgaattcactgcactggcctgggaccagcaaaaataaactggaagcaaaca 125
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 266 aaatcatcttgaattcactgcactggcctgggaccagcaagaataaactggaagcaaaca 325
Query: 126 gtgtaagttaaacattctactcagtctctgtgctttttattcaattcttttgctttttaa 185
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 gtgtaagttaaacattccactcagtctctgtgctttttattcaattcttttgctttttaa 385
Query: 186 aaattgcataggaacaaattaaataaattgctttgtactcttgcacacatgttgttttga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 aaattgcataggaacaaattaaataaattgctttgtactcttgcacacatgttgttttga 445
Query: 246 ggtgggtataatcaagaaagacaatggaaaataatttggcattttaatgtagtgaatgct 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 ggtgggtataatcaagaaagacaatggaaaataatttggcattttaatgtagtgaatgct 505
Query: 306 tagaactatcatcaacagtcctacccagagttcaggcacatatccaacctttgctctact 365
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 506 tagaactatcatcaacagtcctaccgagagttcaggcacatatccaacctttgctcttct 565
Query: 366 ctctttataatcatataanatgatgtgagattgtctgctattgcatgctttatccttcga 425
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctctttataatcatataaaatgatgtgagattgtctgctattgcatgctttatccttcga 625
Query: 426 gttctggagaaagaaaatgagaa 448
|||||||||||||||||||||||
Sbjct: 626 gttctggagaaagaaaatgagaa 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_d23.g1 MSMg01no081_d23.g1 CHROMAT_FILE:
MSMg01no081_d23.g1 PHD_FILE: MSMg01no081_d23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:23 2005
(356 letters)
>mm_chr14_85435955_85436711
Length = 757
Score = 652 bits (337), Expect = 0.0
Identities = 352/357 (98%), Gaps = 1/357 (0%)
Strand = Plus / Minus
Query: 1 ctgaagaagg-catcactgaggattttcttatgatggagctagagttttaaaggcctgtt 59
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 557 ctgaagaaggccatcactgaggattttcttatgatggagctagagttttaaaggtctgtt 498
Query: 60 ggggttggatagaatattcatctctgcctgagacacaactgaatattaagagtacagcct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 ggggttggatagaatattcatctctgcctgagacacaactgaatattaagagtacagcct 438
Query: 120 cgaataagtttgtgatttctgatatcgggagtcacgaggaaatctgtcaacactttcttg 179
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 cgaataagtttgtgaattctgatatcgggagtcacgaggaaatctgtcaacactttcttg 378
Query: 180 ctggtaagtacaaaattagagtacataatttctaaatccccttttcagaattctttaact 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctggtaagtacaaaattagagtacataatttctaaatccccttttcagaattctttaact 318
Query: 240 aatatgtcatgaatttactcattgaacgaaatatgaagtaggggttagggacagagagag 299
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 317 aatatgtcatgaatttactcattgaatgaaatatgaagtaggggttagggacagagagag 258
Query: 300 tacaaataacccgaaaaagcctttactagtttttgacaatgaaaaatatttccaaat 356
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 257 tacaaataacccgaaaaagcctttacaagtttttgacaatgaaaaatatttccaaat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 757
Length adjustment: 9
Effective length of query: 347
Effective length of database: 748
Effective search space: 259556
Effective search space used: 259556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
