Query= MSMg01no081_m13.b1 MSMg01no081_m13.b1 CHROMAT_FILE:
MSMg01no081_m13.b1 PHD_FILE: MSMg01no081_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:06 2005
(588 letters)
>mm_chr14_59180373_59181363
Length = 991
Score = 1073 bits (555), Expect = 0.0
Identities = 581/591 (98%), Gaps = 3/591 (0%)
Strand = Plus / Plus
Query: 1 attacatcttctgtggggaaaattacccatctcattgctagacaggcctattaaggctca 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 201 attacatcttctgtggggaaaattacccatctcgttgctagacaggcctattaaggctca 260
Query: 61 ccgctacagagctggaaaataaggttgtgagcagaatacaaaaccagaacaacattaaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgctacagagctggaaaataaggttgtgagcagaatacaaaaccagaacaacattaaac 320
Query: 121 aaatgaagtttataaagtatctatagaaaataccccaaacggtagaaagcaggaaaggtg 180
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 aaatgaagtttataaagtatctatagaaaataccccaaatggtagaaagcaggaaaggtg 380
Query: 181 acaaattaatgtcatgacatcagctgctcctataatacactaaaatggtagttttgcatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaaattaatgtcatgacatcagctgctcctataatacactaaaatggtagttttgcatt 440
Query: 241 tcagctttaaaattagtgagaacagaagtagagcttgtgttaatgataaaaagaagcagt 300
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcagctttaaaattagagagaacagaagtagagcttgtgttaatgataaaaagaagcagt 500
Query: 301 aacatttccaggccttcattactcaaacacacacttggttaacacataagatgataactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacatttccaggccttcattactcaaacacacacttggttaacacataagatgataactg 560
Query: 361 caaagggctgcatgaaatagatgtgaatttat---gggtgccttccttcattgatggctt 417
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 caaagggctgcatgaaatagatgtgaatttataacgggtgccttccttcattgatggctt 620
Query: 418 tttgaatctggaaagatctgacaaacagcttacactagccttggagaaactgagtaacaa 477
||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 tttgaatctggaaagatctaacaaacagcttacactagctttggagaaactgagtaacaa 680
Query: 478 agtcaatgtgtcagctttccatcacttgacacaactactaagaaagtcaacttaaagaag 537
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agtcaatgtgtcagctttctatcacttgacacaactactaagaaagtcaacttaaagaag 740
Query: 538 gaatcatttattttctcccatgaattcagatgtttcagtccacagttaatt 588
||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gaatcgtttattttctcccatgaattcagatgtttcagtccacagttaatt 791
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 991
Length adjustment: 10
Effective length of query: 578
Effective length of database: 981
Effective search space: 567018
Effective search space used: 567018
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_m13.g1 MSMg01no081_m13.g1 CHROMAT_FILE:
MSMg01no081_m13.g1 PHD_FILE: MSMg01no081_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:06 2005
(453 letters)
>mm_chr14_59327316_59328168
Length = 853
Score = 727 bits (376), Expect = 0.0
Identities = 400/408 (98%)
Strand = Plus / Minus
Query: 1 aattctcgtggatgagtgactacatgagcacactggagcagcaaaggaagcacttttcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aattctcgtggatgagtgactacatgagcacactggagcagcaaaggaagcacttttcaa 549
Query: 61 tggtcctttaccccaaatccttttgtaagtagtttctttggaacactacagagtttcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 tggtcctttaccccaaatccttttgtaagtagtttctttggaacactacagagtttcttt 489
Query: 121 ggtatagaaataatgttactgtaaaagttagctggagatatgcctacaaatggcagatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ggtatagaaataatgttactgtaaaagttagctggagatatgcctacaaatggcagatgt 429
Query: 181 ctgtgactcggtaagtctgtagaactctgagcttcacaaatgaaactcatttcttttcat 240
|||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 428 ctgtgacttggtaagtctgtagaactctgagtttcacaaatgaaactcatttcttttcat 369
Query: 241 tacgcaaaggctcataacatttaaaaacaaaaggcttctatgtaacgtgtcactcactgc 300
|||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 368 tacgcaaaggctcagaacatttaaaaacaaaaggcttctatgtaacatgtcactcactgc 309
Query: 301 ttgcttgggtcaaagaatctttttgtcaactacacatcactgcctattggttacccattc 360
|||||||||||||||||||||||||| | ||| |||||| ||||||||||||||||||||
Sbjct: 308 ttgcttgggtcaaagaatctttttgtgacctatacatcattgcctattggttacccattc 249
Query: 361 tactccaaacatgttcagagccataaagaaaaagaaggaattgatgag 408
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 tactccaaacatgttcagagccataaagaaaaagaaggaattgatgag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space: 373449
Effective search space used: 373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
