Query= MSMg01no082_i14.b1 MSMg01no082_i14.b1 CHROMAT_FILE:
MSMg01no082_i14.b1 PHD_FILE: MSMg01no082_i14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:01 2005
(611 letters)
>mm_chr14_75904834_75905847
Length = 1014
Score = 1087 bits (562), Expect = 0.0
Identities = 597/610 (97%), Gaps = 3/610 (0%)
Strand = Plus / Plus
Query: 5 gaattccctcaaggttccgctctcccagtccccctgtgcattcctgctttaccagctgtc 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctcaaggctctgctctcccagtccccctgtgcattcctgctttaccagctgtc 264
Query: 65 tgctgggctccgtgtgacgactaatcaggcagctatccaactggagtacagccccattac 124
||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgccgggctcggtgtgactactaatcaggcagctatccaactggagtacagccccattac 324
Query: 125 ctctattgtaaagggacaatggagcctagtgggacttagaggt---taaagaatcaaaga 181
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 325 ctctattgtaaagggacaatggagcctagtgggacttagaggtcgttaaagaatcaaaga 384
Query: 182 catacagggggaaggctgaagtcttttagaaccttctccttgacccctacaaggatttcg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 catacagggggaaggctgaagtcttttagaaccttctccttgacccctacaaggatttcg 444
Query: 242 ggggcttttgtgaggtgagaaggaactcccaggtctgaccaagtggtcaagggagtgagt 301
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 445 ggggcttttgtgaggtgagaagggactcccaggtctgaccaagtggtcaagggagtgagt 504
Query: 302 gaccctcttacccaccctccaagctccaactttcctgagagctggcccagactcccctca 361
|||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 505 gaccctcttacccacccttcaagctccaactttcctgagagctagcccagactcccctca 564
Query: 362 gaggccacgtttgcattttaacaaagttgtataggtgatctgtgtgcgcactgcacaggg 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaggccacgtttgcattttaacaaagttgtataggtgatctgtgtgcgcactgcacaggg 624
Query: 422 ttgaggactgtgggtctagctcacagagtagttagtgaaaggggctttctggtgcttgtg 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttgaggactgtgggtctagctcacagagtagttagtgaaaggggctttctggtgcttgtg 684
Query: 482 aaactgctaggattgctatatgtgatttacacacgtgtgaactttgggatggggtgagct 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aaactgctaggattgctatatgtgatttacacacgtgtgaactttgggatggggtgagct 744
Query: 542 gtagatgtgtcctccactccactgattccctcaggcatgaggtggagagaaaggaagtaa 601
||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 745 gtagatgtgtcctccactccactgattcccttaggtatgaggtggagagaaaggaagtaa 804
Query: 602 gccagctgtc 611
||||||||||
Sbjct: 805 gccagctgtc 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1014
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1004
Effective search space: 603404
Effective search space used: 603404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_i14.g1 MSMg01no082_i14.g1 CHROMAT_FILE:
MSMg01no082_i14.g1 PHD_FILE: MSMg01no082_i14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:01 2005
(481 letters)
>mm_chr14_76061107_76061985
Length = 879
Score = 903 bits (467), Expect = 0.0
Identities = 477/481 (99%), Gaps = 2/481 (0%)
Strand = Plus / Minus
Query: 1 tcttgttaacccccctgcccctgtaacgtgttttacatattctagtgtggcattggagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 tcttgttaacccccctgcccctgtaacgtgttttacatattctagtgtggcattggagtt 620
Query: 61 tgcccggtccaagaagctcttctctgtgcctttaaaattgttccaacatctccctgcagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tgcccggtccaagaagctcttctctgtgcctttaaaattgttccaacatctccctgcagg 560
Query: 121 gtttctagtgctttttcactttttttttttttttttgctagcaggtcgtttattttcaac 180
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtttctagtgctttttcac--tttttttttttttttgctagcaggtcgtttattttcaac 502
Query: 181 gcctcgtgctttatacacagttccattcacttgacagcattgtgtttgtcctactccagt 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 501 gcctcgtgctttatacacagttccattcgcttgacagcattgtgtttgtcctactccagt 442
Query: 241 gggtaatatatttacacagatccagcacatggaggggacatgttaagaatacttgatcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggtaatatatttacacagatccagcacatggaggggacatgttaagaatacttgatcca 382
Query: 301 tactgtgccgaagaaaagcaagagctgctatttttcagtattaacattacactcggtatt 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 tactgtgccgaagaaaagcaagagctgctatttttcagtattagcattacactcggtatt 322
Query: 361 tggacagcggagatcttaggatcccaagagggagcctgatggtagaggcacacagagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggacagcggagatcttaggatcccaagagggagcctgatggtagaggcacacagagaag 262
Query: 421 aatttgctggccatagagcagtcatttctgcaatgctcagcttccacaagggtagcagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aatttgctggccatagagcagtcatttctgcaatgctcagcttccacaagggtagcagga 202
Query: 481 a 481
|
Sbjct: 201 a 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 879
Length adjustment: 10
Effective length of query: 471
Effective length of database: 869
Effective search space: 409299
Effective search space used: 409299
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
