Query= MSMg01no083_b22.b1 MSMg01no083_b22.b1 CHROMAT_FILE:
MSMg01no083_b22.b1 PHD_FILE: MSMg01no083_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:45 2005
(581 letters)
>mm_chr14_31427698_31428679
Length = 982
Score = 1087 bits (562), Expect = 0.0
Identities = 574/580 (98%), Gaps = 5/580 (0%)
Strand = Plus / Plus
Query: 5 gaattccctgactca---ccaagtcaaggagactgtgggcttccacaactcaggagctag 61
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctgac--agaaccaagtcaaggagactgtgggcttccacaactcaggagctag 262
Query: 62 gcctagcaggaactgcagggaagggggagagaaagcctttaccagagcccatggtctcag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gcctagcaggaactgcagggaagggggagagaaagcctttaccagagcccatggtctcag 322
Query: 122 gtcatagccaggtcccagcacaggaatgtctctgcaggactggcctcacgtccttgctgg 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtcatagccaggtcccagcacaggaatgtctctgcaggactggcctcacgtccttgctgg 382
Query: 182 ggctcctcctcccacccctccctctctccacaggaccagcacccacccatgtcctctcct 241
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 383 ggctcctcctcccacccctccctctctccacgggaccagcacccacccatgtcctctcct 442
Query: 242 cccccactcttcaacactctattctcccagcccaggatgctctcccagctgggcctctgc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cccccactcttcaacactctattctcccagcccaggatgctctcccagctgggcctctgc 502
Query: 302 ccacagcatggcaccttctcagctagcagtgttctcagaagccagaggcctcagcctagc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ccacagcatggcaccttctcagctagcagtgttctcagaagccagaggcctcagcctagc 562
Query: 362 atttaaggctccccacaccctggccccatcctgttctccatctcaaatgcctctggctgc 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 atttaaggctccccacaccctggccccatcctgttctccatctcaaatgcctctggctgc 622
Query: 422 ttggcacctcacttcccagcccctgtgaacctggacatgtccccttagtcataatggctt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ttggcacctcacttcccagcccctgtgaacctggacatgtccccttagtcataatggctt 682
Query: 482 tcttctcatgtatctatctagatagttcaaaagccagccctgggaatcttttcccactcc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 tcttctcatgtatctatctagatagttcaaaagccagccctgggaatcttttcccactcc 742
Query: 542 tgaggaaggcaactgcttccctattgataagtaacctgtc 581
||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgaggaaggcaactgcttccctattgataagtaacctgtc 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 982
Length adjustment: 10
Effective length of query: 571
Effective length of database: 972
Effective search space: 555012
Effective search space used: 555012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_b22.g1 MSMg01no083_b22.g1 CHROMAT_FILE:
MSMg01no083_b22.g1 PHD_FILE: MSMg01no083_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:46 2005
(609 letters)
>mm_chr14_31515916_31516924
Length = 1009
Score = 708 bits (366), Expect = 0.0
Identities = 399/420 (95%), Gaps = 18/420 (4%)
Strand = Plus / Minus
Query: 201 aaattcacagagatctaccggcctctgccgcccaagcactggtattaaaggtatagacca 260
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1009 aaattcacagagatctaccggcctctgccgcccaagtactggtattaaaggtatagacca 950
Query: 261 ccacacctggctagaagtatatttttaaaaacttctaagtgggccaggtattgtatatat 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949 ccacacctggctagaagtatatttttaaaaacttctaagtgggccaggtattgtatatat 890
Query: 321 gccttcaataccaacactggggaaacaaaggcagaactcttgagttctaggccagccaag 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 gccttcaataccaacactggggaaacaaaggcagaactcttgagttctaggccagccaag 830
Query: 381 gttacatagtgagggcctgcctcagaattacaaaaccaaaccaaacc----------aac 430
||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 829 gttacatagtgagggcctgcctcagaattacaaaaccaaaccaaaccaaaccaaacaaac 770
Query: 431 aataataacaaaaccttgtaattaatagaaaaagtcacattaaaaggcatcattttgaga 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 aataataacaaaaccttgtaattaatagaaaaagtcacattaaaaggcatcattttgaga 710
Query: 491 aaatgtcacatcaccatgagaggtgcaagaagtcccacagaggttctttagagtatgatg 550
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 709 aaatgtcacatcaccatgagaggtgcaagaagtcccacacaggttctttagagtatgatg 650
Query: 551 tggtaactgccacacagctcagcaattctaccccacccccac-ccccagtacctcagtag 609
|||||| ||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 649 tggtaagtgccacacagctcagcaattctacccc-------cgccccagtacctcagtag 597
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
