Query= MSMg01no084_p16.b1 MSMg01no084_p16.b1 CHROMAT_FILE:
MSMg01no084_p16.b1 PHD_FILE: MSMg01no084_p16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:09 2005
(622 letters)
>mm_chr14_58740141_58741162
Length = 1022
Score = 893 bits (462), Expect = 0.0
Identities = 480/486 (98%)
Strand = Plus / Minus
Query: 1 gaacgtgctgaatgataccctggcaccaactgcccttagttccttccttcctgcatcaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 gaacgtgctgaatgataccctggcaccaactgcccttagttccttccttcctgcatcaac 427
Query: 61 tcatcagcccggctttattttgtatttgtaacctctgtcttctttcttattttcctaatc 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tcatcagcctggctttattttgtatttgtaacctctgtcttctttcttattttcctaatc 367
Query: 121 agtatacaggaattacccatctacctttctgatagttgaattctattgtcaggacctgaa 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 agtatacaggaattacccacctacctttctgatagttgaattctattgtcaggacctgaa 307
Query: 181 tccctttacttctattgcaagatgtgttatggttcacaatatgttggcaaatcttttgcc 240
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 306 tccctttacttctattgcaagatgtgctatggttcacaatatgttggcaaatcttttgcc 247
Query: 241 tttgcttgatggaatgccatagaaatgttagggtgggtgacgtctctaacagtgatgtgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 tttgcttgatggaatgccatagaaatgttagggtgggtgacgtctctaacagtgatgtgc 187
Query: 301 aagctttctatattcttagtggtttgttacgctacatgttctagcagctactgaaaggcg 360
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 186 aagctttctatattcttagtggtttgttacgctacatgttctagcagttactgaaaggtg 127
Query: 361 acagaatcttaagatctacttattttgttcttgaggttttaatcacactcaactcacata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 acagaatcttaagatctacttattttgttcttgaggttttaatcacactcaactcacata 67
Query: 421 ggtgaaagctggacttattaggtgtacattttagattggtgagtatgctaaatgaaacca 480
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 66 ggcgaaagctggacttattaggtgtacattttagattggtgagtatgctaaatgaaacca 7
Query: 481 cttatc 486
||||||
Sbjct: 6 cttatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1022
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1012
Effective search space: 619344
Effective search space used: 619344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_p16.g1 MSMg01no084_p16.g1 CHROMAT_FILE:
MSMg01no084_p16.g1 PHD_FILE: MSMg01no084_p16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:09 2005
(561 letters)
>mm_chr14_58593095_58594055
Length = 961
Score = 1054 bits (545), Expect = 0.0
Identities = 559/567 (98%), Gaps = 6/567 (1%)
Strand = Plus / Plus
Query: 1 agacatacacacacacacacacacacacacacaca------cacagacacactatatata 54
||||||||||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct: 195 agacatacacacacacacacacacacacacacacacacatgcacagacacactacatata 254
Query: 55 tacacacacagtctcgaactagagggggtagtaagcccagagtttcctagtcacacaaag 114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tacacacacagtctcgaactagagggggtagtaagcccagagtttcctagtcacacaaag 314
Query: 115 ctttccacaatagctttaattttccaacatggtaggcaaaattagtgataaaaagttggc 174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctttccacaatagctttaattttccaacatggtaggcaaaattagtgataaaaagttggc 374
Query: 175 attctgtctgcctgtttacttttgggtagctactggctaccaaaacagctagtcaggctg 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 attctgtctgcctgtttacttttgggtagctactggctaccaaaacagctagtcaggctg 434
Query: 235 ttcgcacactctcatgtgcagtgacaaaaagatgtaaattctcagtattaagtctgtgtg 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ttcgcacactctcatgtgcagtgacaaaaagatgtaaattctcagtattaagtctgtgtg 494
Query: 295 attataactgccccatatttctagttttgtgctattctgaattcgggtagctattctata 354
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 495 attataactgccccatatttctagttttgtgctattctgaattcgggtagttattctata 554
Query: 355 tataattcctagacaaatattcaatctctatgaagttcccataagtgaggtcctgggaag 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tataattcctagacaaatattcaatctctatgaagttcccataagtgaggtcctgggaag 614
Query: 415 ataaaagggagactgatgctgagacactgttaatttttacaagaagacagactaagccag 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ataaaagggagactgatgctgagacactgttaatttttacaagaagacagactaagccag 674
Query: 475 agtgatagcacatcatatctgaggtagataaggaaccagtgaaaaattttaattgttcag 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 agtgatagcacatcatatctgaggtagataaggaaccagtgaaaaattttaattgttcag 734
Query: 535 actttatacaaagtctaactccatact 561
|||||||||||||||||||||||||||
Sbjct: 735 actttatacaaagtctaactccatact 761
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 6
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 961
Length adjustment: 10
Effective length of query: 551
Effective length of database: 951
Effective search space: 524001
Effective search space used: 524001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
