Query= MSMg01no086_h06.b1 MSMg01no086_h06.b1 CHROMAT_FILE:
MSMg01no086_h06.b1 PHD_FILE: MSMg01no086_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:12 2005
(458 letters)
>mm_chr14_97156721_97157577
Length = 857
Score = 859 bits (444), Expect = 0.0
Identities = 453/456 (99%), Gaps = 2/456 (0%)
Strand = Plus / Plus
Query: 4 ggaattcc-aacaactctccacagttaaacatgaacaaatgaatgctactgtgcccctct 62
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattccaaacaactcttcacagttaaacatgaacaaatgaatgctactgtgcccctct 262
Query: 63 gcttacctgcttgttctcagttcagatcttgtatttctatgcacttcaggttctcttact 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gcttacctgcttgttctcagttcagatcttgtatttctatgcacttcaggttctcttact 322
Query: 123 tcaaaatggttccataaaccttgtttgctcttatatcaactaacttaattaaaacagttg 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tcaaaatggttccataaaccttgtttgctcttatatcaactaacttaattaaaacagttg 382
Query: 183 cctgagaacattatatacaatctctaattgagactactcctaggtgattcttagttgtgt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cctgagaacattatatacaatctctaattgagactactcctaggtgattcttagttgtgt 442
Query: 243 catgttgacaactaaacctatccaacacacatgccttgttagttaatactaataaagcat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 catgttgacaactaaacctatccaacacacatgccttgttagttaatactaataaagcat 502
Query: 303 aagtgttcaggaaagcatagatattaactcgcatatcagagactttcttatgagtccctt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aagtgttcaggaaagcatagatattaactcgcatatcagagactttcttatgagtccctt 562
Query: 363 aagctttttttttttttttggttctgtaattaggagaggcatactgtgtaacagaatcac 422
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aagctttttttttttttt-ggttctgtaattaggagaggcatactgtgtaacagaatcac 621
Query: 423 ggccatttcaatataaacactgttaaaaaatgtagt 458
||||||||||||||||||||||||||||||||||||
Sbjct: 622 ggccatttcaatataaacactgttaaaaaatgtagt 657
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 857
Length adjustment: 10
Effective length of query: 448
Effective length of database: 847
Effective search space: 379456
Effective search space used: 379456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no086_h06.g1 MSMg01no086_h06.g1 CHROMAT_FILE:
MSMg01no086_h06.g1 PHD_FILE: MSMg01no086_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:12 2005
(499 letters)
>mm_chr14_97262611_97263509
Length = 899
Score = 949 bits (491), Expect = 0.0
Identities = 497/499 (99%)
Strand = Plus / Minus
Query: 1 tagatgggtaaaacaggagtgggttggtaagggagcaccctcttagaggcaatggggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tagatgggtaaaacaggagtgggttggtaagggagcaccctcttagaggcaatggggagg 782
Query: 61 gggctagggctggggggttcacggaggggagaaaaggaaggggataacaattgaaatgta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 gggctagggctggggggttcacggaggggagaaaaggaaggggataacaattgaaatgta 722
Query: 121 aacaaataaaatgattagtaaatttttaaaaggctaatgctctttcagaaccctaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aacaaataaaatgattagtaaatttttaaaaggctaatgctctttcagaaccctaaaaaa 662
Query: 181 atattccaaactggtcctgaatatccagttagaaaaaaatccataaggtattaccattct 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 atattccaaaatggtcctgaatatccagttagaaaaaaatccataaggtattaccattct 602
Query: 241 aattgtgtatcatagactcagaatctgatataataagaaagttctataatgaaaagaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 aattgtgtatcatagactcagaatctgatataataagaaagttctataatgaaaagaaac 542
Query: 301 cttaaattttcttttaaaatagagataattaaactattttcttgttgggtatgtaagata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 cttaaattttcttttaaaatagagataattaaactattttcttgttgggtatgtaagata 482
Query: 361 tgacaagtgtaagtgctgtgaaaatgacaaaaatataaagacaagcattacaataaccat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tgacaagtgtaagtgctgtgaaaatgacaaaaatataaagacaagcattacaataaccat 422
Query: 421 tttatacagtttattgctattaatattttaagtccatacttacaagtattagctctacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tttatacagtttattgctattaatattttaagtccatacttacaagtattagctctacac 362
Query: 481 atgtatgattcttcacttg 499
||||||| |||||||||||
Sbjct: 361 atgtatgtttcttcacttg 343
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 499
Length of database: 899
Length adjustment: 10
Effective length of query: 489
Effective length of database: 889
Effective search space: 434721
Effective search space used: 434721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
