Query= MSMg01no087_b05.b1 MSMg01no087_b05.b1 CHROMAT_FILE:
MSMg01no087_b05.b1 PHD_FILE: MSMg01no087_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:03 2005
(419 letters)
>mm_chr14_79638800_79639623
Length = 824
Score = 702 bits (363), Expect = 0.0
Identities = 405/421 (96%), Gaps = 7/421 (1%)
Strand = Plus / Minus
Query: 5 gaattctcaccacacctcggcttcctgagcaccctgtcagctcacagtgagccactctcc 64
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaattctcaccgcacctctgcttcctgagcaccctgtcagctcacagtgagccactctcc 565
Query: 65 aggctgtcacacctca-ccgcccccaccatgttctcactggcaacagatagcttcttacg 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 aggctgtcacacctcacccgcccccaccatgttctcactggcaacagatagcttcttacg 505
Query: 124 gagtagtgggaggacccggggtgaagctgcttaattttttgtcaaagttctcttgtgttc 183
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 504 gagtagtgggaggacccggggtgaagctgcttaattttttgttaaagttctcttgtgttc 445
Query: 184 tgggaggctccggctatctgcacattacaattctgcctgactcactgcttgaaggttaga 243
||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct: 444 tgggaggctccggctatctgcacattacaattctgccagactcattgcttgaaggttaga 385
Query: 244 ctgttctgtcctggaaattggatgctggctcactggggtcttcgagtct----ctagcag 299
| |||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 384 cagttctgtcctggaaattggatgctggctcactggggtctttgagtctttctctagcag 325
Query: 300 tgtggtgtccaatg-tccccagcatgactgaacaataggagggtaaaaatagctgtggtt 358
||||| |||||||| |||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tgtggcgtccaatgctccc-agcatgactgaacaataggagggtaaaaatagctgtggtt 266
Query: 359 gcctctctttaagactatcttaagtttgtggccatattagctttgatctggcagactagg 418
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcctctctttaagactaacttaagtttgtggccatattagctttgatctggcagactagg 206
Query: 419 a 419
|
Sbjct: 205 a 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 824
Length adjustment: 9
Effective length of query: 410
Effective length of database: 815
Effective search space: 334150
Effective search space used: 334150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no087_b05.g1 MSMg01no087_b05.g1 CHROMAT_FILE:
MSMg01no087_b05.g1 PHD_FILE: MSMg01no087_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:03 2005
(285 letters)
>mm_chr14_79529261_79529945
Length = 685
Score = 516 bits (267), Expect = e-151
Identities = 279/283 (98%)
Strand = Plus / Plus
Query: 1 tttacttgtagcagtaatttggctctctctctacattagggatgctaaggttcccaagta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttacttgtagcagtaatttggctctctctctacattagggatgctaaggttcccaagta 260
Query: 61 cacagagaaaggtttacttcgagtggcaggatatctgatccttgattgaaaagggaaatt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catagagaaaggtttacttcgagtggcaggatatctgatccttgattgaaaagggaaatt 320
Query: 121 tgcaaagtatagaattatcctcctccagtctgatccattaaactgctcaattcagccatc 180
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 321 tgcaaagtatagaattatcctcctccagtctgatctactaaactgctcaattcagccatc 380
Query: 181 gtaacgagtagcatgaacatgccattcttgatcaaaaattgtgtgctatgatttcatgtt 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtaacaagtagcatgaacatgccattcttgatcaaaaattgtgtgctatgatttcatgtt 440
Query: 241 ggcaacatcacaggtagccatcagcccacttctgtcttggggg 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggcaacatcacaggtagccatcagcccacttctgtcttggggg 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 685
Length adjustment: 9
Effective length of query: 276
Effective length of database: 676
Effective search space: 186576
Effective search space used: 186576
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
