Query= MSMg01no088_d16.b1 MSMg01no088_d16.b1 CHROMAT_FILE:
MSMg01no088_d16.b1 PHD_FILE: MSMg01no088_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:37 2005
(639 letters)
>mm_chr14_105192337_105193375
Length = 1039
Score = 1133 bits (586), Expect = 0.0
Identities = 623/636 (97%), Gaps = 2/636 (0%)
Strand = Plus / Plus
Query: 4 ggaattccttcctgtagaaatttggaatctattgatgatgaataatgtcaacatttaaga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccttcctgtagaaatttggaatctattgatgatgaataatgtcaacatttaaga 263
Query: 64 gcacctttaggaaaatccagactgatgtttacctaaacaaatgaccaccactgcctccta 123
|||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 264 gcacctttagtaaaatctagactgatgtttacctaaacaaatgaccaccattgcctccta 323
Query: 124 agttgataaacaaaattaatcatcacagaagtcaaaacaatggctctaccacaatttcat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agttgataaacaaaattaatcatcacagaagtcaaaacaatggctctaccacaatttcat 383
Query: 184 atcatttggtgttcagggtggaaaacatgttcaagccattatatcaatttctttaactgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 atcatttggtgttcagggtggaaaacatgttcaagccattatatcaatttctttaactgc 443
Query: 244 aaaaaacaaaaaacagaaagaaagaaaagaaaaaataaaccctcaaaccattcctactaa 303
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aaaaaacaaaaaacaaaaagaaagaaaagaaaaaataaaccctcaaaccattcctactaa 503
Query: 304 aatcagaaattagactaagtgccccctctctccatttctattcagtacaatgcttgaggt 363
|||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 504 aatcagaaatcagactaagtaccccctctctccatttctattcagtaaaatgcttgaggt 563
Query: 364 ctttactagtacaataaaagaaggaaataaaagataagcaagaaaaaaaagatgtcaaag 423
||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 564 ctttactagtaaaataaaagaaggaaataaaagataagcaagaaaaaaaa--tgtcaaag 621
Query: 424 ttcagattgccgaaaatatgattctaaatgtaagagacactaaccactgactaaaaacct 483
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ttcaaattgccgaaaatatgattctaaatgtaagagacactaaccactgactaaaaacct 681
Query: 484 cttagagctgctaatgaggttcagcaaagtggcaggatgcgaggtgaacacaggacacag 543
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 cttagagctgctaatgaagttcagcaaagtggcaggatgcgaggtgaacacaggacacag 741
Query: 544 tagccttcctagcatcagtgacaaacatactgaagagtccagtcagggaaacagcctcat 603
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tagccttcctagcatcaatgacaaacatactgaagagtccagtcagggaaacagcctcat 801
Query: 604 tcatcatgtgtgcgcacaggtacacatatgcacaca 639
||||||||||||||||||||||||||||||||||||
Sbjct: 802 tcatcatgtgtgcgcacaggtacacatatgcacaca 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1039
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1029
Effective search space: 647241
Effective search space used: 647241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no088_d16.g1 MSMg01no088_d16.g1 CHROMAT_FILE:
MSMg01no088_d16.g1 PHD_FILE: MSMg01no088_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:38 2005
(480 letters)
>mm_chr14_105261099_105261978
Length = 880
Score = 913 bits (472), Expect = 0.0
Identities = 478/480 (99%)
Strand = Plus / Minus
Query: 1 ctcattttcttatttctcgacagatgtaaaagctgtaaggtagtgaaagagaagaaattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ctcattttcttatttctcgacagatgtaaaagctgtaaggtagtgaaagagaagaaattt 472
Query: 61 gttgactgtgaagtccatctggctgttccttctctatctccattgatcaccatgttgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gttgactgtgaagtccatctggctgttccttctctatctccattgatcaccatgttgatt 412
Query: 121 agatggttggatggtctctctttcttttttaaagttccatttacaagcccatctagggtg 180
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 agatgggaggatggtctctctttcttttttaaagttccatttacaagcccatctagggtg 352
Query: 181 ggtcctaggaaagatacccttccagaagaggagagcaattttttgcatgagggacatatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggtcctaggaaagatacccttccagaagaggagagcaattttttgcatgagggacatatg 292
Query: 241 catacctgtgctttccctccctgcttgaacccacaaataaattcccaagaatcttgtgtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 catacctgtgctttccctccctgcttgaacccacaaataaattcccaagaatcttgtgtt 232
Query: 301 tatctttgttctcacagaagcatacaatttaggagctgaaaactaggctcagcagttcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 tatctttgttctcacagaagcatacaatttaggagctgaaaactaggctcagcagttcag 172
Query: 361 cacacttgctgttcctgcagagaaatgagatttgatttttatcttctacatggcacttca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 cacacttgctgttcctgcagagaaatgagatttgatttttatcttctacatggcacttca 112
Query: 421 cagtcacctataattccatttttaggtgattcagtgagcttttcaggactctgtggacac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 cagtcacctataattccatttttaggtgattcagtgagcttttcaggactctgtggacac 52
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
