XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCC
ATATTATTACTTATGTAATATTATGGACACCTTCTAACTTTTCTACTTCC
TGTGTTCAGAATTGTTTCAGCGATGAAACTATGAGAACTTTGCCACCATT
TCATTTGACACATTCCTTGTTCCCCAAGACTTGATTTGCAATCAACAGTT
ATGCAAATTTCATATCAAGTTATGTTTTCACAATTAAACTTGCAATAACA
TATGCAGCCATTGCAACAGATAATATGACAAAATGTCAGAGGTGGGGACA
AGATAGAGTAATCAAATTTGTGGGGCTTTGAAAGTAATTTAATAATAGAA
GGATTTATTTTTTTCCAAAGGCTTGTGTTTCCTAGAGAATATGCAGGGAA
GCCAAGTCATATAGTTTTAATGTCTTGTTTTGCTTATGTATCACTTCATG
TAAAGTTTTTGATAATTTCAATGTGAATTTTATTAAACAATGCCTATGGA
CAATTTTCACTGGGGCTCATGACAAATTGAAAATGTATGACAATCCCAGT
CTACTTGCTGTGAGCATAGTAACTATATAAAATATTTGATGTTTTCTCCA
TCCATTAAGCAATTATAAAATCTTGCATAGTTTTAAAATGTCAATTATTT
TAAATAATTCCATATTTTTTAATAGGGCGATAAAGTGCTATTAATACTAC
GATATCTCATTGTCTTAACAGN

CGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTCTTTATGTCCTCTACCATCATCAT
GAGATATGCTTTTAAATCCAGGTCTACCTTTTCAGGTGTGTTAGGGTGTC
CTGGACTGGGAGAAGTGGGCGTTCTGGGTTCTGATGATGGTGAGTGGTCC
TGGTTTCTGTTAGTAGGATTCTTACGTTTACCTTTCGCCATCTGGCAATC
TCTGGAGTTAGTTGTTATAGTTGTCTTTGTTAAGAGATTGTTCCTCTGTT
GATTTTGTTACCCTCAATCAGCAGACGTGGGAGACAAGCTCTTTCCTCTG
AGTTTCAGTGGTCAGAGCAGTCTCTGCAGTCAAGCTCTCCTCTTTCGGTG
AAGGTGTACAGTTATCTGGTGTTTGGACCTCCTCCTGGCTGAAGGTGTAG
TCCCAAAACAGGATCTTTTGCAGAAGCTGTGTTGCTTTGGCCAGGAAGGT
GGCCGGTTGTCTGGAGTCAAAGATGGCGCCACCCCAGAAGCTCTGCGACT
CTTGCCCGTACCAGGAACGGCTGGCCTCTGTATTCCATGCGGTCACCCGA
GCATCCTACCCTCCGCGTAGTCCCGGATTCTAGAAGGCTCCCGCCGGTGC
CTGTGACACAAACCTCTCAGGCCGGCCTGACCCCCGTGCTCTCCCCAGGA
ATGGTGGCCGTTTTGCCTGTTT

Query= MSMg01no088_d22.b1 MSMg01no088_d22.b1 CHROMAT_FILE:
MSMg01no088_d22.b1 PHD_FILE: MSMg01no088_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:39 2005
         (525 letters)



>mm_chr14_109513105_109514030
          Length = 926

 Score =  857 bits (443), Expect = 0.0
 Identities = 503/523 (96%), Gaps = 3/523 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattccatattattacttatgtaatattatggacaccttctaacttttctacttcctgt 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gaattccatattattacttatgtaatattatggacaccttctaacttttctacttcctgt 667

                                                                       
Query: 65  gttcagaattgtttcagcgatgaaactatgagaactttgcc-accatttcatttgacaca 123
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 666 gttcagaattgtttcagcgatgaaactatgagaactttgccaaccatttcatttgacaca 607

                                                                       
Query: 124 ttccttgttccccaagacttgatttgcaatcaacagttatgcaaatttcatatcaagtta 183
           |||||||||||||||| |||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 606 ttccttgttccccaagtcttgatttacaatcaacagttatgcaaatttcgtatcaagtta 547

                                                                       
Query: 184 tgttttcacaattaaacttgcaataacatatgcagccattgcaacagataatatgacaaa 243
            ||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 546 cgttttcacaattaaacttgcaataacatatgcagccattacgacagataatatgacaaa 487

                                                                       
Query: 244 atgtcagaggtggggacaagatagagtaatcaaatttgtggggctttgaaagtaatttaa 303
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 atgtcagagatggggacaagatagagtaatcaaatttgtggggctttgaaagtaatttaa 427

                                                                       
Query: 304 taatagaaggatttatttttttccaaaggcttgtgtttcctagagaatatgcagggaagc 363
           ||||| ||| ||||||||||| ||||||||||||||||||||||||||||||||| ||||
Sbjct: 426 taataaaagaatttatttttt-ccaaaggcttgtgtttcctagagaatatgcaggaaagc 368

                                                                       
Query: 364 caagtcatatagttttaatgtcttgttttgcttatgtatcacttcatgtaaa-gtttttg 422
           ||| ||||||||||||||||||||||||||||||||| ||| || ||| ||| |||||||
Sbjct: 367 caactcatatagttttaatgtcttgttttgcttatgtgtcattttatgcaaaagtttttg 308

                                                                       
Query: 423 ataatttcaatgtgaattttattaaacaatgcctatggacaattttcactggggctcatg 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ataatttcaatgtgaattttattaaacaatgcctatggacaattttcactggggctcatg 248

                                                      
Query: 483 acaaattgaaaatgtatgacaatcccagtctacttgctgtgag 525
           |||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 247 acaaattgaaaatgtatgccaatcccactctacttgctgtgag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 926
Length adjustment: 10
Effective length of query: 515
Effective length of database: 916
Effective search space:   471740
Effective search space used:   471740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)