Query= MSMg01no089_b14.b1 MSMg01no089_b14.b1 CHROMAT_FILE:
MSMg01no089_b14.b1 PHD_FILE: MSMg01no089_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:47 2005
(318 letters)
>mm_chr14_92058605_92059322
Length = 718
Score = 592 bits (306), Expect = e-173
Identities = 312/314 (99%)
Strand = Plus / Plus
Query: 5 gaattcatatgaaatgtcctgagggagactatttaatgaagacttggatcacagcaccag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatatgaaatgtcctgagggagactatttaatgaagacttggatcacagcaccag 264
Query: 65 aaaaggaaacgcatcacacagagtatggcttatttttaatcccacaaatgtagcaatcct 124
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 265 aaaaggaaacgcatcacacagagtatagcttatttttaatcccacaaatgtagcaatcct 324
Query: 125 gtcatcttcagagtcacaaacaagtccctagcattctttatatggctagaattttccatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtcatcttcagagtcacaaacaagtccctagcattctttatatggctagaattttccatg 384
Query: 185 aaacagttatgtgagtgaagatgctgccttgcaaatgagacactttcataaataaatatt 244
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 385 aaacagttatgtgagtgaagatgctgccttgcaaatcagacactttcataaataaatatt 444
Query: 245 attttcttaaagtaatttatctcatttatcagaaagtttaaatttgagactcttttatta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 attttcttaaagtaatttatctcatttatcagaaagtttaaatttgagactcttttatta 504
Query: 305 ttgatgctgtgtct 318
||||||||||||||
Sbjct: 505 ttgatgctgtgtct 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no089_b14.g1 MSMg01no089_b14.g1 CHROMAT_FILE:
MSMg01no089_b14.g1 PHD_FILE: MSMg01no089_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:41:47 2005
(284 letters)
>mm_chr14_92147239_92147923
Length = 685
Score = 466 bits (241), Expect = e-136
Identities = 270/285 (94%), Gaps = 12/285 (4%)
Strand = Plus / Minus
Query: 1 tttatgacta-catgtttcattatttcttttatttctctgtcatgtactatatcttggga 59
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 tttatgactataatgtttcattatttcttttatttctctgtcatgtactatatcttggga 256
Query: 60 aaaaactggaagatctcctgattcaacccatctaacagttccccttcacctgtacactga 119
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 255 aaaaactggaagatctcctgattcaacccatctaacagttccctttcacctgtacactga 196
Query: 120 ctagtttttgtgtcaacttgacaccagctggagttatcacagaaaaaggagcttcagttg 179
||||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 195 ctagttttt-tgtcaacttgacac-agctagagttatcacagaaaaaggagcttcagttg 138
Query: 180 aggaaatgcctctatgagatccaactgtaaggcattctctcaattagtgatcaaggggga 239
|||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 137 aggaaatgcctctatgagatccaactgtaaggcatt---------agtgatcaaggggga 87
Query: 240 aaagccccttgtgggtgggaccatccctgggctggtagtcttggg 284
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 86 aaagccccttgtgggtgggaccatccctgggctggtagtcttggg 42
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
