Query= MSMg01no091_b05.b1 MSMg01no091_b05.b1 CHROMAT_FILE:
MSMg01no091_b05.b1 PHD_FILE: MSMg01no091_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:27 2005
(356 letters)
>mm_chr14_104479606_104480360
Length = 755
Score = 634 bits (328), Expect = 0.0
Identities = 346/352 (98%), Gaps = 1/352 (0%)
Strand = Plus / Plus
Query: 5 gaattctcctctatgcgaaataattgtagaagataatcctgtctgaatgagtgacaagat 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcctctatg-gaaataattgtagaagataatcctgtctgaatgagtgacaagat 263
Query: 65 acttatatatgaacgaaatgtgccattcccaactgtgtatagaacacacagagtagaaag 124
||||||||| ||| |||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 acttatataggaaggaaacgtgccattcccaactgtgtatagaacacacagagtagaaag 323
Query: 125 ttacaaaatggcttgataaaaaaaaaatctaaagaaatttggtatctccagagtttacat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttacaaaatggcttgataaaaaaaaaatctaaagaaatttggtatctccagagtttacat 383
Query: 185 cagaagacagtactgttggaagaggtgactacaaagtcataattgaaacaacaggtttaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagaagacagtactgttggaagaggtgactacaaagtcataattgaaacaacaggtttaa 443
Query: 245 caattggattcttaagtagcagagtttcctgtgttgggtgacctcagaaagcaaagttta 304
||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||
Sbjct: 444 caattggattcttaagtagtagagtttcctgtgttgggtgacttcagaaagcaaagttta 503
Query: 305 tgtgctgtttatttctcagaaactgtgactgaaacccagctgtgtgagggag 356
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgtgctgtttatttctcagaaactgtgactgaaacccagctgtgtgagggag 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 356
Length of database: 755
Length adjustment: 9
Effective length of query: 347
Effective length of database: 746
Effective search space: 258862
Effective search space used: 258862
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no091_b05.g1 MSMg01no091_b05.g1 CHROMAT_FILE:
MSMg01no091_b05.g1 PHD_FILE: MSMg01no091_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:44:27 2005
(346 letters)
>mm_chr14_104622959_104623704
Length = 746
Score = 630 bits (326), Expect = 0.0
Identities = 341/346 (98%)
Strand = Plus / Minus
Query: 1 ttccctggatatggtgaggctccattgcatcctttcctgctaccttccagccggccattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ttccctggatatggtgaggctccattgcatcctttcctgctaccttccagccggccattg 487
Query: 61 cttccctcattttcccaactgtgcacaatcactgttgctctacgtcatttccacttcgag 120
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 486 cttccctcatttttccaactgtgcacaatcactgttgctctacgtcatttccactttgag 427
Query: 121 cgctcatccttgcccatggcatgggggatatccagttttcaatcctgatagacttagaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 cgctcatccttgcccatggcatgggggatatccagttttcaatcctgatagacttagaag 367
Query: 181 tcagattcttcattgcaataaaccttgcgcatttcctcacttgttccgagtttctgtctt 240
| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 366 tgagattcttcattgcaataaaccttgcacatttcctcacttgttccgagtttctgtctt 307
Query: 241 cttagcaacacaggagggaagttgagctctgtgctctcatctcagatctcttactttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 306 cttagcaacacaggagggaagttgagctctgtgctctcatctcagatctctaactttcaa 247
Query: 301 gtttattccttgaggcgatcagcgttgttctgttcccaaatgagtt 346
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gtttattccttgaggcgatcagcgttgttctgttcccaaatgagtt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 746
Length adjustment: 9
Effective length of query: 337
Effective length of database: 737
Effective search space: 248369
Effective search space used: 248369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
