Query= MSMg01no091_l09.b1 MSMg01no091_l09.b1 CHROMAT_FILE:
MSMg01no091_l09.b1 PHD_FILE: MSMg01no091_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:19 2005
(271 letters)
>mm_chr14_101066550_101067219
Length = 670
Score = 501 bits (259), Expect = e-146
Identities = 265/267 (99%), Gaps = 1/267 (0%)
Strand = Plus / Minus
Query: 5 gaattcagcatatcgcttcaaatacatcctcgagcactcttgctcaacctccattctcag 64
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 gaattcagcaaat-gcttcaaatacatcctcgagcactcttgctcaacctccattctcag 412
Query: 65 cttaatctaagctacttttcagtccccttattcctccatcactcctaacctctcaatgtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cttaatctaagctacttttcagtccccttattcctccatcactcctaacctctcaatgtc 352
Query: 125 tgagcctagctagggtcaattttcaattttttagatcatatatgctgaaagcttttacta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 tgagcctagctagggtcaattttcaattttttagatcatatatgctgaaagcttttacta 292
Query: 185 accaaatgttacacagtgcagtttatgaaagacaaaaccagagctccccaaataatgcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 accaaatgttacacagtgcagtttatgaaagacaaaaccagagctccccaaataatgcaa 232
Query: 245 taggggtacttagacgtgcccccagcc 271
|||||||||||||||||||||||||||
Sbjct: 231 taggggtacttagacgtgcccccagcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 670
Length adjustment: 9
Effective length of query: 262
Effective length of database: 661
Effective search space: 173182
Effective search space used: 173182
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no091_l09.g1 MSMg01no091_l09.g1 CHROMAT_FILE:
MSMg01no091_l09.g1 PHD_FILE: MSMg01no091_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:45:19 2005
(364 letters)
>mm_chr14_100975920_100976683
Length = 764
Score = 681 bits (352), Expect = 0.0
Identities = 361/364 (99%)
Strand = Plus / Plus
Query: 1 tctattaactctaattccttttttgtgccctttcccctactacttcattaacatgaactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctattaactctaattccttttttgtgccctttcccctactacttcattaacatgaactc 260
Query: 61 acacagaagatatcccatagaatacagaggacaaaatgccaataccttgatttccaagtt 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacagaagatatcccgtagaatacagaggacaaaatgccaataccttgatttccaagtt 320
Query: 121 tctaaatagactcttgagatttgtatcagagagattctagaaagccagaatggtcatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctaaatagactcttgagatttgtatcagagagattctagaaagccagaatggtcatata 380
Query: 181 ttctatttataaaagtctcagcatgaaggcaaccagattttgctctcacagatattttgg 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctatttctaaaagtctcagcatgaaggcaaccagattttgctctcacagatattttgg 440
Query: 241 aagtaagcttaggcctagagaccaagtgggtcatctaagctggtgtatgttgggggtgat 300
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 aagtaagcttaggcctagagaccaagtgggtcatctaagctggtatatgttgggggtgat 500
Query: 301 gcatactgcacagggtatggctctgttctaagaacttgtatggaaaaagtctcctctgga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcatactgcacagggtatggctctgttctaagaacttgtatggaaaaagtctcctctgga 560
Query: 361 gtaa 364
||||
Sbjct: 561 gtaa 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 364
Length of database: 764
Length adjustment: 9
Effective length of query: 355
Effective length of database: 755
Effective search space: 268025
Effective search space used: 268025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
