Query= MSMg01no095_m12.b1 MSMg01no095_m12.b1 CHROMAT_FILE:
MSMg01no095_m12.b1 PHD_FILE: MSMg01no095_m12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:54 2005
(595 letters)
>mm_chr14_82313357_82314351
Length = 995
Score = 714 bits (369), Expect = 0.0
Identities = 407/423 (96%), Gaps = 8/423 (1%)
Strand = Plus / Minus
Query: 4 ggaattcctttgcatatattgtcattttcttataagaattgttttgggcatatcttccat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggaattcctttgcatatattgtcattttcttataagaattgttttgggcatatcttccat 376
Query: 64 aaaattgttaaacctaaaatttctttctgtgtcaatcatgcagtattaaaatactcaaaa 123
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 375 aaaattgttaaacctaaaatttctttctgagtcaatcatgcagtattaaaatactcaaaa 316
Query: 124 atcagtaaaatgaattatcactacatttaaaatatttacttcatcctaactttgttatgc 183
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atcagtaaaatgagttatcactacatttaaaatatttacttcatcctaactttgttatgc 256
Query: 184 tatatgtctagaaatttatccaatttttaaaaggctcttttccagtggaatgtaaatata 243
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 255 tatatgtctagaaatttatccaatttttaaaagtctcttttccagtggaatgtaaatata 196
Query: 244 taaaatattatctatat----taacataatcaagatattcttaatgtgtttctttagagt 299
||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||
Sbjct: 195 taaaatattatctatattaactaacataatcaagacattcttaatgtgtttctttagagt 136
Query: 300 gcatgtttttttaaggattcattaatttgaaattcacagaatatatatatatatatacac 359
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 135 gcatgtttttttaaggattcattaatttgaaattcagagaatatatatatatatatatat 76
Query: 360 acacacatacacacacacacatctgcacatatctatactatctatctacaca--cacaca 417
||||||||||||||||||| |||||| |||||||||||||||||||||||| ||||||
Sbjct: 75 acacacatacacacacaca--tctgcatatatctatactatctatctacacatacacaca 18
Query: 418 tat 420
|||
Sbjct: 17 tat 15
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 57
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_m12.g1 MSMg01no095_m12.g1 CHROMAT_FILE:
MSMg01no095_m12.g1 PHD_FILE: MSMg01no095_m12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:51:55 2005
(279 letters)
>mm_chr14_82164667_82165345
Length = 679
Score = 470 bits (243), Expect = e-137
Identities = 267/277 (96%), Gaps = 5/277 (1%)
Strand = Plus / Plus
Query: 2 tgtgccagagaatcacaactagtctctctgttatcagagaaaaaaccactctcctagaac 61
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 203 tgtgccagagaatcacaactagtctctctgttatcagagaaaaa-ccactctcctagaac 261
Query: 62 agctgcaaggaaatgaattctatcaacaactagaatgaactccggaacaccttccttgta 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 agctgcaaggaaatgaattctatcaacaactagaatgaactccggaacaccttccttgta 321
Query: 122 caacttccaaatctatttcagccagctaatccttaaaggctgctccagatatgctgtgcc 181
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 322 caacttccaaatctatttcagtcagctaatccttaaagggtgctccagatatgctgtgcc 381
Query: 182 tagaaggaaaactccagaaatacaacatttaaaaatgtagtgtgtggttatatatttatt 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tagaaggaaaactccagaaatacaacatttaaaaatgtagtgtgtggttatatatttatt 441
Query: 242 tgtatgtatgtatacatatatatatatatgtatgtat 278
||||||||||||| ||| ||| |||||||||||
Sbjct: 442 tgtatgtatgtatg----tatgtatgtatgtatgtat 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
