Query= MSMg01no095_o05.b1 MSMg01no095_o05.b1 CHROMAT_FILE:
MSMg01no095_o05.b1 PHD_FILE: MSMg01no095_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:03 2005
(666 letters)
>mm_chr14_103654543_103655612
Length = 1070
Score = 1230 bits (636), Expect = 0.0
Identities = 657/666 (98%), Gaps = 4/666 (0%)
Strand = Plus / Minus
Query: 5 gaattccaaattaatttaccattctctgtagccttaaagtcagacttgggaattaattat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 gaattccaaattaatttaccattctctgtagccttaaagtcagacttgggaattaattat 811
Query: 65 ggagttccggtgctttgcccagcatgctaatgtatccgaattttacctttctcttcttgt 124
||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 810 ggagttctggtgctttgtccagcatgctaatgtatcagaattttacctttctcttcttgt 751
Query: 125 ccttgtatccagatatactattgattattatgtctgaaagtctttagacaagggtcacgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 ccttgtatccagatatactattgattattatgtctgaaagtctttagacaagggtcacgt 691
Query: 185 ccctgcttcaccacctcccataagtgctctgattgtcatttctttgagctctagttttca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ccctgcttcaccacctcccataagtgctctgattgtcatttctttgagctctagttttca 631
Query: 245 ggtcctgtctgacattgcagaatctatataatttatgtagagtacatggaatgcac---- 300
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 630 ggtcctgtctgacattgcagaatttatataatttatgtagagtacatggaatgcacatat 571
Query: 301 atatacacaggtataatttttattttttgttcttctctttttaaatagtttagtaaatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 atatacacaggtataatttttattttttgttcttctctttttaaatagtttagtaaatga 511
Query: 361 actcatgactaccatagacgaagttcaaagaacctattctgcaagtcctgcttatctttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 actcatgactaccatagacgaagttcaaagaacctattctgcaagtcctgcttatctttg 451
Query: 421 gtctcagattcccagtgctcctactgaaaatcagtgggaacatttcatatgtccgtgctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 gtctcagattcccagtgctcctactgaaaatcagtgggaacatttcatatgtccgtgctt 391
Query: 481 tttgaaccgtccccgtttgcattgaagtagatgttcacatgaggacattaattcacaagg 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 390 tttgaaccgtccccgtttgcattgaagtagatgttcccatgaggacattaattcacaagg 331
Query: 541 cacacctctaaagtgacacttgttcacttgcccaaacttgctgtccccagagttgagaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 cacacctctaaagtgacacttgttcacttgcccaaacttgctgtccccagagttgagaat 271
Query: 601 caacctttttcactgttcttcccattcatatgactgtattctctagatgaaaaccaagtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 caacctttttcactgttcttcccattcatatgactgtattctctagatgaaaaccaagtg 211
Query: 661 aaaaac 666
||||||
Sbjct: 210 aaaaac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1070
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1060
Effective search space: 695360
Effective search space used: 695360
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_o05.g1 MSMg01no095_o05.g1 CHROMAT_FILE:
MSMg01no095_o05.g1 PHD_FILE: MSMg01no095_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:03 2005
(580 letters)
>mm_chr14_103511333_103512312
Length = 980
Score = 1079 bits (558), Expect = 0.0
Identities = 573/578 (99%)
Strand = Plus / Plus
Query: 1 ctttgtgcctaactttattcccaggattctctctctctgccctggaacttccacctcact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttgtgcctaactttattcccaggattctctctctctgccctggaacttccacctcact 260
Query: 61 atttcctgcctaaggtaaaaggccaacattttattgacaagtaatgcttccctaacagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttcctgcctaaggtaaaaggccaacattttattgacaagtaatgcttccctaacagtg 320
Query: 121 caagagattctctgtacagaatctcatctatcccaggatggcttcaaaactgctatgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagagattctctgtacagaatctcatctatcccaggatggcttcaaaactgctatgcag 380
Query: 181 cttagtatgctctcctgcctctgcttccagagcgctgttttaaagttgtgcaccaccgtg 240
||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||
Sbjct: 381 cttagtatgctctcctgcctccgcttccagagcgctgtagtaaagttgtgcaccaccgtg 440
Query: 241 ccttcttcctggggtgctgtggatggaactgagggacttgtacagggtgggcaggcccca 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 ccttcttcctggggtgctgtggatggaactgagggacttgtacagggtgggcaggcccta 500
Query: 301 tttcttctcttctggtgctgtcctttccctttcgactgctcccactcatgttctcatttg 360
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 501 tttcttctcttctggtgctgtcctttccctttcaactgctcccactcatgttctcatttg 560
Query: 361 tctgcaggtatgtgtaggctcaggtgaacctttgtgctcgtggggagctgagacaacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctgcaggtatgtgtaggctcaggtgaacctttgtgctcgtggggagctgagacaacaag 620
Query: 421 gcagaactaccacacagagctgccttttcaaagtgtgttctggggaaccagacctctatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcagaactaccacacagagctgccttttcaaagtgtgttctggggaaccagacctctatc 680
Query: 481 ctaaagtgcacggcaagcaccttactgactgagctgctcctggctcccaatgctggttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctaaagtgcacggcaagcaccttactgactgagctgctcctggctcccaatgctggttta 740
Query: 541 aactcctcacaattgattaacagagatgaaggccatta 578
||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aactcctcacaattgattaacagagatgaaggccatta 778
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
