Query= MSMg01no096_d12.b1 MSMg01no096_d12.b1 CHROMAT_FILE:
MSMg01no096_d12.b1 PHD_FILE: MSMg01no096_d12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:30 2005
(295 letters)
>mm_chr14_100516604_100517298
Length = 695
Score = 532 bits (275), Expect = e-155
Identities = 290/295 (98%)
Strand = Plus / Minus
Query: 1 aatgtcattattgaagttgatattgtgataatatccagtttcatctccaaccaaagctcc 60
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 403 aatgtcattattcaggttgatattgtgataatatccagtttcatctccaaccaaagcttc 344
Query: 61 cttctgtctacatccttgctagtcttttggtgttactcagttatttttgttcttcacaaa 120
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 cttctgtctacgtccttgctagtcttttggtgttactcagttatttttgttcttcacaaa 284
Query: 121 tacagagaattttgtagctgcaaggtttttattatgctctctgtacccaaaagcaatgca 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 283 tacagagaattttgtagctgcaagatttttattatgctctctgtacccaaaagcaatgca 224
Query: 181 tttatcaccttggatcgataggacagtggttctccacctgtaggttgtgacccctttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tttatcaccttggatcgataggacagtggttctccacctgtaggttgtgacccctttggg 164
Query: 241 agatgcatattagatatcctgaagatcagatatgtacattataattcacagcagt 295
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 agatgcatattagatatcctgaagatcagatatgtacattataattcacagcagt 109
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space: 196196
Effective search space used: 196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no096_d12.g1 MSMg01no096_d12.g1 CHROMAT_FILE:
MSMg01no096_d12.g1 PHD_FILE: MSMg01no096_d12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:30 2005
(455 letters)
>mm_chr14_100388551_100389405
Length = 855
Score = 791 bits (409), Expect = 0.0
Identities = 442/455 (97%), Gaps = 4/455 (0%)
Strand = Plus / Plus
Query: 1 tcttgcttagatgtcaggggttgcaccaataaccaagcagaacatatagcacaggaccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tcttgcttagatgtcaggggttgcaccaataaccaagcagaacatatagcacaggaccca 264
Query: 61 gaacaatgagcaatcagaatacagcacaggaccaaacaaacaaacaaacaaacaaagacg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 265 gaacaatgagcaatcagaatacagcacaggaccaaacaaacaaacaaacaaa----gacg 320
Query: 121 acaacaacaaaaagccatcagtcagcagaaaacatgccccaaaagtgggatgacagggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaacaacaaaaagccatcagtcagcagaaaacatgccccaaaagtgggatgacagggaa 380
Query: 181 tcttagcgtgaagaactaataacacacagcttaaatgttcaggggatctaagtatattat 240
||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 381 tcttagcatgaagagctaataacacacagcttaaatgttcaggcgatctaagtatattat 440
Query: 241 gaagacccatttggctctacttaatcagctggctcagtgaaactttcattacaaagacta 300
|||||| |||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaagactcatttggctctactcagtcagctggctcagtgaaactttcattacaaagacta 500
Query: 301 tctgcctcattttacttagtggcatggattctagttcacgtgctgttaaccgagtccatt 360
|||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 tctgcctcatgttacttagtggcatggattctagttcacgtgctgttaagtgagtccatt 560
Query: 361 ctcatgtgtacattatagaatatgctacataactaacatggctaccaaggcacataagat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctcatgtgtacattatagaatatgctacataactaacatggctaccaaggcacataagat 620
Query: 421 ccagttttgtgggactactattgtacacgctgtct 455
|||||||||||||||||||||||||||||||||||
Sbjct: 621 ccagttttgtgggactactattgtacacgctgtct 655
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
