Query= MSMg01no097_h16.b1 MSMg01no097_h16.b1 CHROMAT_FILE:
MSMg01no097_h16.b1 PHD_FILE: MSMg01no097_h16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:14 2005
(280 letters)
>mm_chr14_61710612_61711291
Length = 680
Score = 482 bits (249), Expect = e-140
Identities = 272/285 (95%), Gaps = 10/285 (3%)
Strand = Plus / Plus
Query: 1 tgattttttttagtgtctctctctacattcttttttgcatagtctgagtccgttcgggag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tgattttttttagtgtctctctctacattcttttttgcatagtctgagtcagttcgggag 260
Query: 61 ataattttaccaacggaaactccacatttccctagttttagggtgtcagatcaaacatac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ataattttaccaacggaaactccacatttccctagttttagggtgtcagatcaaacatac 320
Query: 121 attttgtttgtttgttttgcctgtttgtccttgctccagtttttgtcaaagctatagata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttgtttgtttgttttgcctgtttgtccttgctccagtttttgtcaaagctatagata 380
Query: 181 cccttagctttatccagcaaggcaactgtctgtgcctgagctgtttggtcttagacacta 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cccttagttttatccagcaaggcaactgtctgtgcctgagctgtttggtcttagacacta 440
Query: 241 tttctccttttt-----gcctgagtatggatggcttctttttcag 280
||||||| |||||||||||||||||| |||||||||
Sbjct: 441 tttctcc-----aaacagcctgagtatggatggctcctttttcag 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 280
Length of database: 680
Length adjustment: 9
Effective length of query: 271
Effective length of database: 671
Effective search space: 181841
Effective search space used: 181841
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no097_h16.g1 MSMg01no097_h16.g1 CHROMAT_FILE:
MSMg01no097_h16.g1 PHD_FILE: MSMg01no097_h16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:14 2005
(178 letters)
>mm_chr14_61789304_61789881
Length = 578
Score = 321 bits (166), Expect = 1e-92
Identities = 175/178 (98%)
Strand = Plus / Minus
Query: 1 ttcactacataaacctagatggctttgaattcatagagacccctttgcctcttccccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttcactacataaacctagatggctttgaattcatagagacccctttgcctcttccccctg 319
Query: 61 agtactggcattaaaggtatgtgtcaccacaccttgcaaagataaatggcatgactattt 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 318 agtactggcattaaaggtatgtgccaccacaccttgcaaagataaatggcatgactattt 259
Query: 121 tgacagaagccatcaataaatagatgactccagagaactaggaatccgaggctgggaa 178
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 258 tgacagaagccatcaataaatagatgagtccagagaactaggaatccggggctgggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 178
Length of database: 578
Length adjustment: 8
Effective length of query: 170
Effective length of database: 570
Effective search space: 96900
Effective search space used: 96900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
