Query= MSMg01no097_n03.b1 MSMg01no097_n03.b1 CHROMAT_FILE:
MSMg01no097_n03.b1 PHD_FILE: MSMg01no097_n03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:41 2005
(649 letters)
>mm_chr14_99208126_99209175
Length = 1050
Score = 725 bits (375), Expect = 0.0
Identities = 386/393 (98%), Gaps = 7/393 (1%)
Strand = Plus / Minus
Query: 5 gaattctggaagttac----atgaaaggaactatgcaaatagctcaatgacattatcaaa 60
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaattctggaag---caaagatgaaaggaactatgcaaatagctcaatgacattatcaaa 334
Query: 61 gtctcaggagtctcataagacttgccttgtcaagtccagggactccggacttatttctac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gtctcaggagtctcataagacttgccttgtcaagtccagggactccggacttatttctac 274
Query: 121 acccactcccatctccagcacaaactccacccactttcaggtctgtgccttttacctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 acccactcccatctccagcacaaactccacccactttcaggtctgtgccttttacctggg 214
Query: 181 caggcctttagcatatctgttcctctgaagatcccacaatctgaaggcttcccaggaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 caggcctttagcatatctgttcctctgaagatcccacaatctgaaggcttcccaggaggt 154
Query: 241 ctgctacagccagggccacaagtttctcaggagacctgcagcaacccaaggtcacaggag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 ctgctacagccagggccacaagtttctcaggagacctgcagcaacccaaggtcacaggag 94
Query: 301 gcaggctccagacagagacaccaagaccagctacgagcagagataatcggacggcaagat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93 gcaggctccagacagagacaccaagaccagctacgagcagagataatcggacggcaagat 34
Query: 361 gaaagcgcaagaccacaagcaacagaaggcaat 393
|||||||||||||||||||||||||||||||||
Sbjct: 33 gaaagcgcaagaccacaagcaacagaaggcaat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 649
Length of database: 1050
Length adjustment: 10
Effective length of query: 639
Effective length of database: 1040
Effective search space: 664560
Effective search space used: 664560
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no097_n03.g1 MSMg01no097_n03.g1 CHROMAT_FILE:
MSMg01no097_n03.g1 PHD_FILE: MSMg01no097_n03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:42 2005
(590 letters)
>mm_chr14_99092326_99093315
Length = 990
Score = 1141 bits (590), Expect = 0.0
Identities = 590/590 (100%)
Strand = Plus / Plus
Query: 1 tctagctcacatttagatcaagtgaaaacagttttgttgttaaagtatgattcttaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctagctcacatttagatcaagtgaaaacagttttgttgttaaagtatgattcttaaaag 260
Query: 61 tacaaacttaagatacggaagttgtgaataactcttcaatttcaaaggacaattaacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tacaaacttaagatacggaagttgtgaataactcttcaatttcaaaggacaattaacatt 320
Query: 121 ttgttccttctgttatttgtctttaacatgttcctacttgcagctcaaaggacaaataaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgttccttctgttatttgtctttaacatgttcctacttgcagctcaaaggacaaataaa 380
Query: 181 atccattaagaagagagtttaatattggtgatgtcataagactgtaccccaggcagcagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atccattaagaagagagtttaatattggtgatgtcataagactgtaccccaggcagcagc 440
Query: 241 ttcagagactcattacagttttccagtcctgactcctgatttctttgccctgaatttaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcagagactcattacagttttccagtcctgactcctgatttctttgccctgaatttaca 500
Query: 301 gaatcagagagacaccaactgttcactataagattttttacttttctaaatagatgggga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaatcagagagacaccaactgttcactataagattttttacttttctaaatagatgggga 560
Query: 361 ggtttccatactattcaaaagtcttgggctaaagggatttctgctctactgtggctgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtttccatactattcaaaagtcttgggctaaagggatttctgctctactgtggctgtat 620
Query: 421 gtgttttttaggaacacatgtcatgaaatagttaaacatcagccacattgtttatatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtgttttttaggaacacatgtcatgaaatagttaaacatcagccacattgtttatatttt 680
Query: 481 tttacaaggggagaaaacaatctaaagtggccactgttgatggctctgttctaaaagcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tttacaaggggagaaaacaatctaaagtggccactgttgatggctctgttctaaaagcaa 740
Query: 541 aaatctaactataggcacatgcacagtgagacgcagcacatccgtcaagc 590
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaatctaactataggcacatgcacagtgagacgcagcacatccgtcaagc 790
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space: 568400
Effective search space used: 568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
