Query= MSMg01no098_p10.b1 MSMg01no098_p10.b1 CHROMAT_FILE:
MSMg01no098_p10.b1 PHD_FILE: MSMg01no098_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:14 2005
(539 letters)
>mm_chr14_80417218_80418156
Length = 939
Score = 975 bits (504), Expect = 0.0
Identities = 529/538 (98%), Gaps = 4/538 (0%)
Strand = Plus / Plus
Query: 6 gaattcattgctcc-cattctgtaaatac-tcagatgtgtagcagcctggatgtctagtg 63
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 202 gaattcattgctccacattctgtaaatacatcagatgtgtagcagcctggatgtctagtg 261
Query: 64 ttttatcaatgagaggttgggtttaatgatttgattattcctttatgtggtaggccctct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ttttatcaatgagaggttgggtttaatgatttgattattcctttatgtggtaggccctct 321
Query: 124 tatgtttgctaggactatcagaaggggtgaagaaacacctagaagccactatctaggaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tatgtttgctaggactatcagaaggggtgaagaaacacctagaagccactatctaggaaa 381
Query: 184 gagccatgtaaaccagagtctatgccctgatgtgattataatgaaggtggctatacttga 243
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 382 gagccatgtaaacgagagtctatgccctgatgtgattataatgaaggtggctatactgga 441
Query: 244 tggagtcgcatttacaagccttatccctgttcttcctaa--gtcctgcagggtaggcatt 301
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 442 tggagtcgcatttacaagccttatccctgttcttcctaacagtcctgcagggtaggcatt 501
Query: 302 gcttatttgacttaaggaaactgagtctaagaccgttaagcaactgaagagtggagtcag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gcttatttgacttaaggaaactgagtctaagaccgttaagcaactgaagagtggagtcag 561
Query: 362 gatttacactggagcctgtctgctaatagctactctgtgctaggctggtgtgtgtccata 421
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gatttagactggagcctgtctgctaatagctactctgtgctaggctggtgtgtgtccata 621
Query: 422 gctgctctaacaagggggtgtcactgtggtttctggaataacaaggcagttccaacaagg 481
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 622 gctgctctaacaagggggtgtcactgtggtgtctggaacaacaaggcagttccaacaagg 681
Query: 482 catccacctgatcagctcttagttagctttgcttccttgctcacagagcagctggaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 catccacctgatcagctcttagttagctttgcttccttgctcacagagcagctggaag 739
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_p10.g1 MSMg01no098_p10.g1 CHROMAT_FILE:
MSMg01no098_p10.g1 PHD_FILE: MSMg01no098_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:14 2005
(486 letters)
>mm_chr14_80589710_80590596
Length = 887
Score = 870 bits (450), Expect = 0.0
Identities = 479/490 (97%), Gaps = 4/490 (0%)
Strand = Plus / Minus
Query: 1 tctaagagcctcaaagac-acaaccacaatgtgcttcttaaaacaggtactgctcaagtt 59
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 tctaagagcctcaaagacaacaaccacaatgtgcttcttaaaacaggtactgctcaagtt 523
Query: 60 gtcttaaaaatcaagtaagattcaaaagcctccaaatcttcagttttctatacggaggga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gtcttaaaaatcaagtaagattcaaaagcctccaaatcttcagttttctatacggaggga 463
Query: 120 ttaaacagatgttcgtggtgccaatgaacatgtaaaacgtagaaagaactatcattaact 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 ttaaacagatgttcgtggtgccaatgaacatgtaaaacgtagaaagaactatcattaact 403
Query: 180 taatcttggaagcatttagcttgtgctgttggcacaaaagaacaacacaggttgctgaac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 taatcttggaagcatttagcttgtgctgttggcacaaaagaacaacacaggttgctgaac 343
Query: 240 acctgtacacagaaggataaaaactagaggatcagagacaagaaggacaagttttaaagt 299
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 acctggacacagaaggataaaaactagaggatcagagacaagaaggacaagttttaaagt 283
Query: 300 aatcaacatttagttagtattattatcatttaaacatcaccatctgctgaagcccatgtg 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 282 aatcaacatttagttagtattattatcatttaaacatcagcatctgctgaagcccatgtg 223
Query: 360 ccacaagcttaccctaccatagattattattattattat---attacaccaactcccagt 416
||||||||| |||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 222 ccacaagctaaccccaccatagattattattattattattatattacaccaactcccagt 163
Query: 417 gatgtatctttacagccaagattgatacattcactgaaacagttaagtgttttagctggc 476
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 162 gatgtatctttacagccaagattgatacattcactgaaacagtgaagtgttttagttggt 103
Query: 477 tgattgattg 486
||||||||||
Sbjct: 102 tgattgattg 93
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 486
Length of database: 887
Length adjustment: 10
Effective length of query: 476
Effective length of database: 877
Effective search space: 417452
Effective search space used: 417452
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
