Query= MSMg01no099_f21.b1 MSMg01no099_f21.b1 CHROMAT_FILE:
MSMg01no099_f21.b1 PHD_FILE: MSMg01no099_f21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:48 2005
(322 letters)
>mm_chr14_100872485_100873206
Length = 722
Score = 561 bits (290), Expect = e-164
Identities = 308/314 (98%)
Strand = Plus / Minus
Query: 5 gaattctattctttcccgttgctttagttctagtctttgggccaacacagtggactaact 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 518 gaattctattctttcaggttgctttagttctagtctttgggccaacacagtggactgact 459
Query: 65 ggtggtgcttttaaaagtgaactgtgatgaagccatatgtgagcacagaagttctagatt 124
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 458 ggtggtgcttttaaaagtgaactgtgatgaagccataggtgagcacagaagttctagatt 399
Query: 125 ttattagtcatgtaaaagataccctgtgaaacaaacaagcccattcctttccttaacagc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttattagtcatgtaaaagataccctgtgaaacaaacaagcccattcctttccttaacagc 339
Query: 185 gctaggctgaacagcaaggatatattgatatagaactaaaggttaacataatttcccctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gctaggctgaacagcaaggatatattgatatagaactaaaggttaacataatttcccctg 279
Query: 245 tatttctgcgtttttattctttgtttttactaaacataaaattctttttttatcacgagc 304
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 278 tatttctgcgtttttattctttgtttttattaaacataaaattctttttttatcacgagc 219
Query: 305 tctatacttccaaa 318
|||| |||||||||
Sbjct: 218 tctaaacttccaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_f21.g1 MSMg01no099_f21.g1 CHROMAT_FILE:
MSMg01no099_f21.g1 PHD_FILE: MSMg01no099_f21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:56:48 2005
(150 letters)
>mm_chr14_100686250_100686798
Length = 549
Score = 267 bits (138), Expect = 2e-76
Identities = 147/150 (98%), Gaps = 1/150 (0%)
Strand = Plus / Plus
Query: 1 attccaagtgagaaggaaattaagggcaggtcaaggttaagatctagagcccgaataaaa 60
|||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 attccaagggagaaggaaattaagggcaggtcaaggttaagatctagagtccgaataaaa 260
Query: 61 cctgtggtcaaaagaaggaaatacatcaagtattggggcaaaaaacaaaaaaaaatgcta 120
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 261 cctgtggtcaaaagaaggaaatacatcaagtattggggcaaaaaa-aaaaaaaaatgcta 319
Query: 121 gcagcattttgaaaaaaagaatacttttaa 150
||||||||||||||||||||||||||||||
Sbjct: 320 gcagcattttgaaaaaaagaatacttttaa 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 150
Length of database: 549
Length adjustment: 8
Effective length of query: 142
Effective length of database: 541
Effective search space: 76822
Effective search space used: 76822
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
