Query= MSMg01no099_i11.b1 MSMg01no099_i11.b1 CHROMAT_FILE:
MSMg01no099_i11.b1 PHD_FILE: MSMg01no099_i11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:03 2005
(457 letters)
>mm_chr14_61395251_61396106
Length = 856
Score = 779 bits (403), Expect = 0.0
Identities = 439/451 (97%), Gaps = 3/451 (0%)
Strand = Plus / Minus
Query: 5 gaattccatcc-ttccatggaccaccaggatgtcctggttctcctagggggaagggaaga 63
||||||||||| |||| |||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 653 gaattccatcctttcc-tggaccaccaggatgtcctggttctcctagggagaagggaaga 595
Query: 64 aagcagacagaagttgagattccaatttcctggttgagtctccaggagtgattgatgcag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 aagcagacagaagttgagattccaatttcctggttgagtctccaggagtgattgatgcag 535
Query: 124 ggagtcctggggtgccccagcccacctcttttcacaccagtgcaggtgaaggtggcgact 183
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 534 ggagtcctggggtgccccagcccacctcttttcgcaccagtgcaggtgaaggtggcgact 475
Query: 184 actagcgtgtatccagggtgttcagtcgtgtaggatgagcaggatctgaaatggttggtg 243
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 actagtgtgtatccagggtgttcagtcgtgtaggatgagcaggatctgaaatggttggtg 415
Query: 244 acgttctgagcaccaggagcatgaggcaaggcttatctaagacattgagggccacgctgt 303
|||||||||||||||||||||||||||||||| | ||||||||||||| |||| |||||
Sbjct: 414 acgttctgagcaccaggagcatgaggcaaggc-aaactaagacattgagagccatgctgt 356
Query: 304 aattgtgtctcaggatgaggagttggaagaggtcagactgtgggaggtgccagatgtacc 363
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 355 aattgtgtctcaggatgaggagttggaagaggtctgactgtgggaggtgccagatgtacc 296
Query: 364 tctcattctgttcccttcccacaactcattctaagagtggaacggaaggctcaccagatt 423
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 tctcattctgttgccttcccacaactcattctaagagtggaacggaaggctcaccagatt 236
Query: 424 ccatgagacatcagggaactccatgatctga 454
|||||||||||||||||||||||||||||||
Sbjct: 235 ccatgagacatcagggaactccatgatctga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 856
Length adjustment: 10
Effective length of query: 447
Effective length of database: 846
Effective search space: 378162
Effective search space used: 378162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no099_i11.g1 MSMg01no099_i11.g1 CHROMAT_FILE:
MSMg01no099_i11.g1 PHD_FILE: MSMg01no099_i11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:04 2005
(358 letters)
>mm_chr14_61256479_61257236
Length = 758
Score = 638 bits (330), Expect = 0.0
Identities = 351/358 (98%)
Strand = Plus / Plus
Query: 1 tcttgtgtttctgtgagtggagcctacagtttgctgaggcaagtatgccgcctcagcgcc 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 tcttgtgtttctgtgagtggagcctacagtttgctgaggcaagtgtgccgcctcagcgcc 260
Query: 61 ttcgacaaaggtagagagatgggttctgcttactgaactgagaatgaccaggacaggaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcgacaaaggtagagagatgggttctgcttactgaactgagaatgaccaggacaggaga 320
Query: 121 gccgggccgtgaccgtgaggatccagaggaaactgcatccttttctggctctggcagggt 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 gccgggccgtgaccgtgaggatccagaggaatctgcatccttttctggctctggcagggt 380
Query: 181 gtgatgcttgataggcccccaaggagctgtggctcctggtaaattcggacattggcacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtgatgcttgataggcccccaaggagctgtggctcctggtaaattcggacattggcacat 440
Query: 241 gccgtttctttttagttctggctctttatggtggcatctgaacacgtgggtggacacagg 300
|||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 gccgtttcaatttagttctggctctttaaggtggcatctgaacacgtgggtggacacagg 500
Query: 301 tgataatacttagagtaactgcgtcggacgcaatactgtcacctctgttgatgaacag 358
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 tgataatacttagagtaagtgcgtcagacgcaatactgtcacctctgttgatgaacag 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
