CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCTGACTGCCTTGTAGGTTCCTTCTACCAGAAATAATACAGCCCA
TCCAATCCCAGCTTTCTTCTTTGTGAGTCTGTGTCTGTACATTCATTCCT
TCCTTACTGCAATCAAACTTCCAGGACCAAGCTATGAAGAACTCACACAC
TTACTTATTTACATAGGATTTTTTTTTCATTCTTCCTTTTTTAGCTCCCA
TTCTACTCCTATTGCTGTATCCATCTAGAGCTCAGGAATGCCAGCCCTCT
CCCATGTCATTGATTAAAAACCTTTCTCTGTTTCTCTCTACTTTTTTCTC
TAATCGAATTTTAAAATTATTTAACTTGTTGCCACTTTTGGAGTTCAGTT
ACAAATGCCATATACTAGGAAATGGTTGTTGTGGGAAATATTAAAAAATG
ATCCCTCCAACTCTTCTGCCCCACCGGGTCAGGTTTCTGCTCTAGTGCAG
GCACTGGTGAGCTACTCTCTCCTAGCTAGCCCCCGCTGCTCTTGTCTCTG
CACTGCTAGTTCTTCTTCATCTATAAACCCATGTAGTTGGCAATCCCACA
GTCCAGTAACTAGACAGGACCACCAACCTCGTAGTTGCATCTCTCAGCAC
CCAGTACCCCGGTAGAATCATGACTCTTAA

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCTGTTTAGCTCTGTACCCCATATTT
TTAAATTGTGTTATTTGGGATTTTGGAAATTCAATGTCATTTAGAAGGGG
GAAGGAAATAATCAGAGAAAGGGAGGGTCCTGAGAGAGAGAAAAGATGGA
GAGGAAAAGGTGAACAGGAACAGATATTTGGGGGTGGCACACATGCCACA
AGATTGAAAAGAAATAAGCACCCTCAAGGAGTGGGATGTGAGGGACCCTC
TACAAAGTACCAGAGACCTGGTGGGTGACAAACTCTCAGGACTCATTCGG
AGTGACCAAAATATCCAATACTGGGGAAAGGGAATTCAAAGAGTCTATCT
CCTGTAGATAAAAAGGCCCTCAAGTGGAAACAGGGTTACTAACTCACAGT
CAAATTCTTTACCCAGTATTGTTCCTGTCTAAAAGAACTGCAGGGACACA
AATGGAGAAGAGACTGAAGGAAAGGCAGTCCAATGACTGGTTCAACTTGG
GATCCATCTCATGGGATTGGGGGACCACAAGGTCTGACACTACTATGCTG
TGCTGTCCTTACAGATGGGAGCATGGTGTGGTTGTCCTCTGAGAAGTCCT
ACAAGCAGCTGACTGAGACAGATTCAGATACTT

Query= MSMg01no099_l03.b1 MSMg01no099_l03.b1 CHROMAT_FILE:
MSMg01no099_l03.b1 PHD_FILE: MSMg01no099_l03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:57:18 2005
         (613 letters)



>mm_chr14_38497446_38498458
          Length = 1013

 Score =  948 bits (490), Expect = 0.0
 Identities = 593/662 (89%), Gaps = 55/662 (8%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctctgactgccttgtaggttccttctaccagaaataatacagcccatccaatccc 64
           ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 gaattctctgactgttttgtaggttccttctaccagaaataatacagcccatccaatccc 213

                                                                       
Query: 65  agctttcttctttgtgagtctgtgtctgtacattcattccttccttactgcaatcaaact 124
           ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 214 agctttcttgtttgtgagtctgtgtctgtacattcatcccttccttactgcaatcaaact 273

                                                                       
Query: 125 tccaggaccaagctatgaagaactcacacacttacttatttacataggatttttttttca 184
           ||||||||||| |||||||| ||||||||||||||||||||||||||||  |||||||||
Sbjct: 274 tccaggaccaatctatgaaggactcacacacttacttatttacatagga--tttttttca 331

                                                                       
Query: 185 ttcttccttttttagctcccattctactcctattgctgtatccatctagagctcaggaat 244
            ||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||
Sbjct: 332 ctcttccttttttagctcccattcgactcctattgctgtatccatctagagcccaggaat 391

                                                                       
Query: 245 gccagccctctcccatgtcattgattaaaaacctttctctgtttctctctacttttttct 304
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 392 gccagccctctcccatgtcattgattaaaaacctttctctgttactctctacttttttct 451

                                                                       
Query: 305 ctaatcgaattttaaaattatttaacttgttgccacttttggagttcagttacaaatgcc 364
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 452 ctaatcgaattttaaaattatttaacttgttgctacttttggagttcagttacaaatgcc 511

                                                                       
Query: 365 atatactaggaaatggttgttgtgggaaatattaaaaaatgatccctccaactcttctgc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atatactaggaaatggttgttgtgggaaatattaaaaaatgatccctccaactcttctgc 571

                                                                       
Query: 425 cccaccgggtcaggtttctgctctagtgcaggcactggtg-------------------- 464
           ||||||||||||||||||||||||||||||||||||||||                    
Sbjct: 572 cccaccgggtcaggtttctgctctagtgcaggcactggtgggtcacaacactatgtccct 631

                                                                       
Query: 465 --------------------------------agctactctctcctagctagccccc-gc 491
                                           ||||||||||||||||||||||||| ||
Sbjct: 632 gcggggtcccactctgcatattcttgccatggagctactctctcctagctagccccccgc 691

                                                                       
Query: 492 tgctcttgtctctgcactgctagttcttcttcatctataaacccatgtagttggcaatcc 551
           ||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||
Sbjct: 692 tgctcttgtctctgcactgctagttcttcctcatctataaacccacgtagttggcaatcc 751

                                                                       
Query: 552 cacagtccagtaactagacaggaccaccaacctcgtagttgcatctctcagcacccagta 611
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 752 cacagtccagtaactagacaggaccaccaacctcgcagttgcatctctcagcacccagta 811

             
Query: 612 cc 613
           ||
Sbjct: 812 cc 813


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1013
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1003
Effective search space:   604809
Effective search space used:   604809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)