Query= MSMg01no101_o17.b1 MSMg01no101_o17.b1 CHROMAT_FILE:
MSMg01no101_o17.b1 PHD_FILE: MSMg01no101_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:19 2005
(638 letters)
>mm_chr14_65355638_65356675
Length = 1038
Score = 1197 bits (619), Expect = 0.0
Identities = 634/639 (99%), Gaps = 2/639 (0%)
Strand = Plus / Minus
Query: 1 agctcagtagtggggtgcttgcttagcatgcatggggtctcaagttcaatctccaccacc 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 901 agctcagtagtggggtgcttgcttagcatgcatggggtctcaaattcaatctccaccacc 842
Query: 61 accttagtcccatagccaatcgcccccaacacaaacctgcgcaatctcctcagttttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 accttagtcccatagccaatcgcccccaacacaaacctgcgcaatctcctcagttttcct 782
Query: 121 tagtttctcctcccaggtcacagtcatttcctggatgagtttctccgattcttccagacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tagtttctcctcccaggtcacagtcatttcctggatgagtttctccgattcttccagacg 722
Query: 181 atctttcagctctggagatttcattgcctaaaaacaaagtgtcacctcatggcataactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atctttcagctctggagatttcattgcctaaaaacaaagtgtcacctcatggcataactg 662
Query: 241 ctcagtgtcgggaaagaacaatcagctggattggaaagggcggggactgtcacctgtcac 300
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 661 ctcagtgccgggaaagaacaatcagctggatgggaaagggcggggactgtcacctgtcac 602
Query: 301 tgagccctccaccactccagcaaggtggcagtcctcaaggtccatagagcctgtgctggg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tgagccctccaccactccagcaaggtggcagtcctcaaggtccatagagcctgtgctggg 542
Query: 361 ggactacagacctaccaaagcaactagggcacatccagaaagacaactttcctccaacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ggactacagacctaccaaagcaactagggcacatccagaaagacaactttcctccaacct 482
Query: 421 actgtgaagatcccattacatttaagaagctacacgttccaagctacttgtaaagaacta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actgtgaagatcccattacatttaagaagctacacgttccaagctacttgtaaagaacta 422
Query: 481 atgattttaattttagtaggttgtacacctagactcaaaagcatgctgcatctcaatctc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgattttaattttagtaggttgtacacctagactcaaaagcatgctgcatctcaatctc 362
Query: 541 tgtctaatgttgatttcaagaatttactcaaagctatgtaagttagatgtgaacatgttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtctaatgttgatttcaagaatttactcaaagctatgtaagttagatgtgaacatgttg 302
Query: 601 caaactggacagtgtttaat-acacttggtcttaagaca 638
|||||||||||||| ||||| ||||||||||||||||||
Sbjct: 301 caaactggacagtg-ttaataacacttggtcttaagaca 264
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no101_o17.g1 MSMg01no101_o17.g1 CHROMAT_FILE:
MSMg01no101_o17.g1 PHD_FILE: MSMg01no101_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:20 2005
(554 letters)
>mm_chr14_65273333_65274286
Length = 954
Score = 1007 bits (521), Expect = 0.0
Identities = 550/568 (96%), Gaps = 14/568 (2%)
Strand = Plus / Plus
Query: 1 ctatgaaaagggn-taacaaaattgagctcctttttgctgagtttgaaaagaattctatt 59
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 ctatgaaaagggagtaacaaaattgagctcctttttgctgagtttgaaaagaattctatt 246
Query: 60 taagcattgcttctggggaatgtagtgttttaagggatagcatgtggctgtcaagtagtt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 taagcattgcttctggggaatgtagtgttttaagggatagcatgtggctgtcaagtagtt 306
Query: 120 gggtctagtcctgagtgctcctgactcagtgtgtatgtgcgggaagtgtcctgaggattg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gggtctagtcctgagtgctcctgactcagtgtgtatgtgcgggaagtgtcctgaggattg 366
Query: 180 acatggagacaggctgagactgggtcactgggttgta-------------actctgttgt 226
||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 367 acatggagacaggctgagactgggtcactgggttgtatttctgatcatagactctgttgt 426
Query: 227 ttgagtgacatttgtgtcttttgagggaagtccaaaggtttccagaactcttcagggtag 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 ttgagtgacatttgtgtcttttgagggaagtccaaaggtttccagaactcttcagggtag 486
Query: 287 ggttcgattcttgtgtgactcagtggctggttgtgcttaagggggttcagtttttctgct 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ggttcgattcttgtgtgactcagtggctggttgtgcttaagggggttcagtttttctgct 546
Query: 347 taactgtctgtggggttgggaaaattaattgaatattaattggtagttcctaatttaatg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 taactgtctgtggggttgggaaaattaattgaatattaattggtagttcctaatttaatg 606
Query: 407 ataactagagttgtagtggctaatttgtcaagataaagaacggaagtgtgtgtgtgtcta 466
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 607 ataactagagttgtagtggttaatttgtcaagataaagaaaggaagtgtgtgtgtgtcta 666
Query: 467 tgtgtttgtgtgtcgtctgtctctctgtcgatgtctgtaatcttaaaacttgttggaggc 526
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 667 tgtgtttgtgtgtcgtctgtctctctgtcgatgtctgtaatcttaaaacttggtggaggc 726
Query: 527 agaaggatctctgaggtgagtctgggct 554
||||||||||||||||||||||||||||
Sbjct: 727 agaaggatctctgaggtgagtctgggct 754
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|