Query= MSMg01no102_c22.b1 MSMg01no102_c22.b1 CHROMAT_FILE:
MSMg01no102_c22.b1 PHD_FILE: MSMg01no102_c22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:41 2005
(444 letters)
>mm_chr14_85640498_85641341
Length = 844
Score = 820 bits (424), Expect = 0.0
Identities = 439/444 (98%)
Strand = Plus / Plus
Query: 1 acatctatcagatagtatcctccctctaagagaaatattcttgcagtttatatataaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acatctatcagatagtatcctccctctaagagaaatattcttgcagtttatatataaaga 260
Query: 61 gtcatataatatattaattattaatctaatcttaagttgcataagtctaagtaaacacac 120
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 gtcatataatatattaattattaatctaatcttaagttgcataagtttaagtaaacacac 320
Query: 121 atttaaaattcgctggtaaaaagtttcttaaatttttctgaatttggagtttagatcata 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttaaaattcgctggtaaaaagattcttaaatttttctgaatttggagtttagatcata 380
Query: 181 atttcaactaggttttggcatcttgaaaaaaaagcccaaaactgtagtcttcctttggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttcaactaggttttggcatcttgaaaaaaaagcccaaaactgtagtcttcctttggaa 440
Query: 241 atgttaaattataatagtgatataatgtataagtcacaatttgtgtctttgttctatagc 300
||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgttaaattagaacagtgatataatgtataagtcacaatttgtgtctttgttctatagt 500
Query: 301 gataacaaactgtcatacttacctctcattcttgataagcttcatctattaattggatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gataacaaactgtcatacttacctctcattcttgataagcttcatctattaattggatca 560
Query: 361 tgtaaataggaatccatattttttctcaaaatcaaaatactccaagtccataaagattac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtaaataggaatccatattttttctcaaaatcaaaatactccaagtccataaagattac 620
Query: 421 attaattacatagttttcttgatc 444
||||||||||||||||||||||||
Sbjct: 621 attaattacatagttttcttgatc 644
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space: 361956
Effective search space used: 361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no102_c22.g1 MSMg01no102_c22.g1 CHROMAT_FILE:
MSMg01no102_c22.g1 PHD_FILE: MSMg01no102_c22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:00:41 2005
(324 letters)
>mm_chr14_85792977_85793699
Length = 723
Score = 518 bits (268), Expect = e-151
Identities = 308/324 (95%), Gaps = 8/324 (2%)
Strand = Plus / Minus
Query: 1 gctgaaatagaaacaagaagcaggagttattacaggcaagagggaaaggccgggcttgac 60
|||||||||||||||||||||||||||||| || | ||||||||| |||||||||
Sbjct: 556 gctgaaatagaaacaagaagcaggagttat--ca--c---agggaaagg-ggggcttgac 505
Query: 61 ctcccgtcattattaattgattttactcaaaataatttttaatcttttcatgagaagtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctcccgtcattattaattgattttactcaaaataatttttaatcttttcatgagaagtga 445
Query: 121 taagctttccatttctgagcaaggtacatgctgaaggacttggaagctgcaaatttagta 180
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 444 taagctttccatttctgagcaagatacacgctgaaggacttggaagctgcaaatttagta 385
Query: 181 tcctatcccttaaggataagctggaaggcctgtttgctctcacattggtgtgcagatttt 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 384 tcctatcccttaaggataagctggaaggtctgtttgctctcacattggtgtgcagatttt 325
Query: 241 atatattcctctattttcctggaaaaggacatttctgcgttaggacattctgtgtaacgc 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atatattcctctaagttcctggaaaaggacatttctgcgttaggacattctgtgtaacgg 265
Query: 301 ccaagatattttgaacatgtttga 324
|||||||||||||||||||||||
Sbjct: 264 gcaagatattttgaacatgtttga 241
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 723
Length adjustment: 9
Effective length of query: 315
Effective length of database: 714
Effective search space: 224910
Effective search space used: 224910
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
