Query= MSMg01no102_l07.b1 MSMg01no102_l07.b1 CHROMAT_FILE:
MSMg01no102_l07.b1 PHD_FILE: MSMg01no102_l07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:22 2005
(207 letters)
>mm_chr14_26040262_26040869
Length = 608
Score = 344 bits (178), Expect = 2e-99
Identities = 199/206 (96%), Gaps = 3/206 (1%)
Strand = Plus / Minus
Query: 4 gaattcttacctctgcccttgctca-aaggaggcactggtaagttttagaggagtcttag 62
||||||||||||||| ||||||||| ||||||||| ||| ||||||||||||||||||||
Sbjct: 408 gaattcttacctctgtccttgctcacaaggaggcattggcaagttttagaggagtcttag 349
Query: 63 agatgactaagcacctggccctgtggattcaacctggaatcct-gactcttagggaggta 121
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 348 agatgactaagcacctggccctgtggattcaacctggaatcctgga-tcttagggaggta 290
Query: 122 gaagcaggagactcccaagtttaagtccaacctaagtagcttagtaagactctgtcttta 181
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 289 gaagcaggagactcccaagtttaagtccagcctaagtagcttagtaagactctgtcttta 230
Query: 182 aacactgaacaaaacacaacatggct 207
||||||||||||||||||||||||||
Sbjct: 229 aacactgaacaaaacacaacatggct 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 608
Length adjustment: 9
Effective length of query: 198
Effective length of database: 599
Effective search space: 118602
Effective search space used: 118602
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_l07.g1 MSMg01no102_l07.g1 CHROMAT_FILE:
MSMg01no102_l07.g1 PHD_FILE: MSMg01no102_l07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:22 2005
(245 letters)
>mm_chr14_25863132_25863776
Length = 645
Score = 426 bits (220), Expect = e-124
Identities = 233/242 (96%), Gaps = 8/242 (3%)
Strand = Plus / Plus
Query: 1 catatgaagttttaattcatactcactccgattcaggagatagtttctccatcttacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catatgaagttttaattcatactcactccgattcaggagatagtttctccatcttacaga 260
Query: 61 caaaaagtctgatcctcacaagagttacagaagtgattgaagactgccaacctataaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaaagtctgatcctcacaagagttacagaagtgattgaagactgccaacctataaata 320
Query: 121 agtttaaaaagcaaagtatccaacagttggtcccttctagagcctcatacagtatgatga 180
|||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttaaaaaagcaaa--------cagttggtcccttctagagcctcatacagtatgatga 372
Query: 181 agttgcctcttctgaaaggtcatctagaggtcatttggcacactctcctttgcagaaatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 agttgcctcttctgaaaggtcatctagaggtcatttggcacactctcctttgcagaaatg 432
Query: 241 ac 242
||
Sbjct: 433 ac 434
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
