Query= MSMg01no102_l12.b1 MSMg01no102_l12.b1 CHROMAT_FILE:
MSMg01no102_l12.b1 PHD_FILE: MSMg01no102_l12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:23 2005
(290 letters)
>mm_chr14_96413260_96413948
Length = 689
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%), Gaps = 1/286 (0%)
Strand = Plus / Plus
Query: 1 ttatctactttttttttccaacaatgtccaagtacagtgatgttcattcctatgtgcagt 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttatctactttttttt-ccaacaatgtccaagtacagtgatgttcattcctatgtgcagt 259
Query: 61 gccagatataaaactgtacactgatcttcttatggttttgtatcttcaacagaaaatagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gccagatataaaactgtacactgatcttcttatggttttgtatcttcaacagaaaatagt 319
Query: 121 ccttgtaggaacagatataaaagtctgattgaaaactttttataaatactgatcatttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ccttgtaggaacagatataaaagtctgattgaaaactttttataaatactgatcatttgc 379
Query: 181 ttctttcttgaaacattgaaatcacaattacgattagtattaatattttgcaatgatcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttctttcttgaaacattgaaatcacaattacgattagtattaatattttgcaatgatcac 439
Query: 241 aaaacatttatattctgggcatcattttctgtaatccatttatgtc 286
|||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaaacagccatattctgggcatcattttctgtaatccatttatgtc 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_l12.g1 MSMg01no102_l12.g1 CHROMAT_FILE:
MSMg01no102_l12.g1 PHD_FILE: MSMg01no102_l12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:23 2005
(244 letters)
>mm_chr14_96523950_96524593
Length = 644
Score = 426 bits (220), Expect = e-124
Identities = 242/256 (94%), Gaps = 13/256 (5%)
Strand = Plus / Minus
Query: 1 caaacatatttgaagacactgtaaagaacttcctggatagtattctgagctgtaagatag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 caaacatatttgaagacactgtaaagaacttcctggatagtattctgagctgtaagatag 252
Query: 61 tcataaaaaaactcactta-ttttaacttataaactttcattacttctctct-------- 111
|||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 251 tcat-aaaaaactcacttacttttaacttataaactttcattacttctctctgtttttaa 193
Query: 112 ---atttattggaagtatctatccagttacctaaatgaatattccaccttctagaatgta 168
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gtcatttattggaagtatctatccagttacctaaatgaatattccaccttctagaatgta 133
Query: 169 ttatcagcatgtgggtggtacttttgtacctccttcatagagttcattcctcattattgg 228
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 132 ttatcagcatgtgggtggtactttagtacctccttcatagagttcattcctcattattgg 73
Query: 229 atgttttaaaatgcta 244
||||||||||||||||
Sbjct: 72 atgttttaaaatgcta 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
