Query= MSMg01no105_n15.b1 MSMg01no105_n15.b1 CHROMAT_FILE:
MSMg01no105_n15.b1 PHD_FILE: MSMg01no105_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:37 2005
(438 letters)
>mm_chr14_50061930_50062767
Length = 838
Score = 737 bits (381), Expect = 0.0
Identities = 395/403 (98%), Gaps = 7/403 (1%)
Strand = Plus / Minus
Query: 5 gaattctccagt----tcctcatatgaacatgaaagcttattttgcaagaagctttaagt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 gaattctccagtgaag---tcatatgaacatgaaagcttattttgcaagaagctttaagt 344
Query: 61 aattgttcaatgattgctgcttactacactctcctacaagtatttcattagaggtaaaag 120
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 aattgttcaatgattgttgcttactacactctcctacaagtatttcattagaggtaaaag 284
Query: 121 aaatatttgtgttctctatcaaatcttggctgagcttttgaggaagctggacatatactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 aaatatttgtgttctctatcaaatcttggctgagcttttgaggaagctggacatatactc 224
Query: 181 ttaaagggttgtttaaggcttttttcctttaaatgcctaaatgatctggagtgatgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ttaaagggttgtttaaggcttttttcctttaaatgcctaaatgatctggagtgatgtttt 164
Query: 241 ctgcttgatatttggttttagtgatttgtatcttctttagttttattttgtcagtttgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 ctgcttgatatttggttttagtgatttgtatcttctttagttttattttgtcagtttgct 104
Query: 301 gcatttaaattttactgacttttttgacaaactatttttttctatttttatctttttttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 103 gcatttaaattttactgacttttttgacaaactatttttttctatttttatctttttttc 44
Query: 361 tttctgctattatctttagtctcatacctctctctgtttggct 403
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 43 tttctgctattatctttagtctcatacctctctctgtttggct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 438
Length of database: 838
Length adjustment: 9
Effective length of query: 429
Effective length of database: 829
Effective search space: 355641
Effective search space used: 355641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no105_n15.g1 MSMg01no105_n15.g1 CHROMAT_FILE:
MSMg01no105_n15.g1 PHD_FILE: MSMg01no105_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:37 2005
(378 letters)
>mm_chr14_49939676_49940453
Length = 778
Score = 723 bits (374), Expect = 0.0
Identities = 377/378 (99%)
Strand = Plus / Plus
Query: 1 tctgcaagattttcttctgtttctaggaacttagctgaggcttaaggtctatacttggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctgcaagattttcttctgtttctaggaacttagctgaggcttaaggtctatacttggag 260
Query: 61 tggaagtgtgacaggtgggacttttctcactcagcctttcaagaacctgcctgaacacgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggaagtgtgacaggtgggacttttctcactcagcctttcaagaacctgcctgaacacgt 320
Query: 121 tcctactacttgatgaagcaaagcccaactctctctcatacccgtgaggctacaaccttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcctactacttgatgaagcaaagcccaactctctctcatacccgtgaggctacaaccttt 380
Query: 181 actgggctaatgctttcaaaaaaatgatctttgaaagtaaatccttcactttggaatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actgggctaatgctttcaaaaaaatgatctttgaaagtaaatccttcactttggaatata 440
Query: 241 actgtgaacccagcacttactatggaactcctttgtcttataagtagtaccgaattcttg 300
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aatgtgaacccagcacttactatggaactcctttgtcttataagtagtaccgaattcttg 500
Query: 301 gggtcttgagcaagagcaggtgaaaactgccattctctgatttatttattcaataaactc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gggtcttgagcaagagcaggtgaaaactgccattctctgatttatttattcaataaactc 560
Query: 361 tttggagactcttagatc 378
||||||||||||||||||
Sbjct: 561 tttggagactcttagatc 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
