Query= MSMg01no108_a20.b1 MSMg01no108_a20.b1 CHROMAT_FILE:
MSMg01no108_a20.b1 PHD_FILE: MSMg01no108_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:45 2005
(660 letters)
>mm_chr14_78863898_78864966
Length = 1069
Score = 1189 bits (615), Expect = 0.0
Identities = 648/665 (97%), Gaps = 13/665 (1%)
Strand = Plus / Plus
Query: 5 gaattctttggactgcc---ttaaacttgagggtcatctttcaaagtcttgccttgccaa 61
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttggactg--gaattaaacttgagggtcatctttcaaagtcttgccttgccaa 262
Query: 62 cgaccaatattttatggtgacattttcctaaacagtttgcgcaaggaaaggacagtgtaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cgaccaatattttatggtgacattttcctaaacagtttgcgcaaggaaaggacagtgtaa 322
Query: 122 tcaaagacactaagtaagtaataagcaaacagatgtgtttaagatagcattttaaaaaaa 181
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 323 tcaaagacactaaataagtaataagcaaacagatgtgtttaagatagcatttaaaaaaaa 382
Query: 182 aa--gtaccagcatatttttaaggaaacaaatacagtagacgcctcatgtgttcaacaat 239
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 383 aaaagtaccagcatatttttaaggaaacaaatacagtagacgcctcatgtgttcaacact 442
Query: 240 attaagcaatggccttgtctatacaaggacattttccagatagcagctgatttaacatga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 attaagcaatggccttgtctatacaaggacattttccagatagcagctgatttaacatga 502
Query: 300 caacacttcaaaattgacattgttgaagatgattgtaagacgtaattgcacttcctctct 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 caacacttcaaaattgacattgttgaagatgattgtaagacgtaattgcacttcctctct 562
Query: 360 ggctctctggggctagtctactgtctttgctatgtccttctttcaatgatgcaagatctt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ggctctctggggctagtctactgtctttgctatgtccttctttcaatgatgcaagatctt 622
Query: 420 tggctctaattatctgttgagatggccatgggaaatggagattattcattcactgagttg 479
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 623 tggctctaattatctgttgagatggccatgggaaatggacattattcattcactgagttg 682
Query: 480 accacagcacctcagatctagctgggggtggg------tctagctatcgactgaattact 533
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 683 accacagcacctcagatctagctgggggtgggggtgggtctagctatcgactgaattact 742
Query: 534 gagttttcttacctgtccctttctttctcttccctttttcttcttaagacttccttttat 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 gagttttcttacctgtccctttctttctcttccctttttcttcttaagacttccttttat 802
Query: 594 ctatgaggaattatttatgtatacgtgtgtatatccgggaatgtttgctgtgggttgagg 653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 ctatgaggaattatttatgtatacgtgtgtatatccgggaatgtttgctgtgggttgagg 862
Query: 654 gtggg 658
|||||
Sbjct: 863 gtggg 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1069
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1059
Effective search space: 688350
Effective search space used: 688350
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no108_a20.g1 MSMg01no108_a20.g1 CHROMAT_FILE:
MSMg01no108_a20.g1 PHD_FILE: MSMg01no108_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:45 2005
(634 letters)
>mm_chr14_79002155_79003188
Length = 1034
Score = 1195 bits (618), Expect = 0.0
Identities = 630/634 (99%)
Strand = Plus / Minus
Query: 1 attttatttccacttacgcaagtctgtttcccttcttactacttaaagttatggatgagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 834 attttatttccacttacgcaagtctgtttcccttcttactacttaaagttatggatgagc 775
Query: 61 cagcagtgcagccctctgagccagtcagtccgtcttgtgactatgatacagaaacagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 774 cagcagtgcagccctctgagccagtcagtccgtcttgtgactatgatacagaaacagatg 715
Query: 121 aagctaaagaggacgacgcgaaagagtcgctatcaggtgagaagtcaatgatgacgtcat 180
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 714 aagctaaagaggacgacgcgaaagagtcgctatcaggtgagaagtcgatgatgacgtcat 655
Query: 181 caggaaagctcagttacaactggctttgcatttatttaattttaagtatgaaatgaactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 654 caggaaagctcagttacaactggctttgcatttatttaattttaagtatgaaacgaactg 595
Query: 241 ttgaatttctatttttctaaaggcctttgggcagtttgtgttattcatgaacactaaaat 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 594 ttgaatttctatttttctaaaggcctttgggcagtctgtgttattcatgaacactaaaat 535
Query: 301 aataatggcaacgtatgagttaggttgacaagtattcttatatctcttgtgagatctaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 aataatggcaacgtatgagttaggttgacaagtattcttatatctcttgtgagatctaag 475
Query: 361 agatatctagagaccaacaataaactaagtgttatgggatgattgagtgtcttagaagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 agatatctagagaccaacaataaactaagtgttatgggatgattgagtgtcttagaagaa 415
Query: 421 atagccaggtttccccactttagcgtgggttgctctcagatttcttgggaaactgcgaga 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 414 atagccaggtttccccactttagcatgggttgctctcagatttcttgggaaactgcgaga 355
Query: 481 aagctgctggcctttgctgcatcaagcttggcctttgacggattcagcagagctttatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aagctgctggcctttgctgcatcaagcttggcctttgacggattcagcagagctttatat 295
Query: 541 tctgctgattgaccaatgcttgttgcgaagctaagctttaaaaccaaaagccttctaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tctgctgattgaccaatgcttgttgcgaagctaagctttaaaaccaaaagccttctaact 235
Query: 601 acaactctgtctctaccaaattactttctgccta 634
||||||||||||||||||||||||||||||||||
Sbjct: 234 acaactctgtctctaccaaattactttctgccta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
