Query= MSMg01no110_i07.b1 MSMg01no110_i07.b1 CHROMAT_FILE:
MSMg01no110_i07.b1 PHD_FILE: MSMg01no110_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:08 2005
(552 letters)
>mm_chr14_102808459_102809418
Length = 960
Score = 978 bits (506), Expect = 0.0
Identities = 542/558 (97%), Gaps = 11/558 (1%)
Strand = Plus / Plus
Query: 5 gaattcttgcagatcattggctttttttt-acca-ttgttttcaattagtaaattgtttc 62
|||| |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||
Sbjct: 204 gaatacttgcagatcattggctttttttttaccaattgtttttaattagtaaattgtttc 263
Query: 63 attgcactatgactgacttggagcaagctatccacatatgtgttgttagggtttatctgg 122
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 attgcactctgactgacttggagcaagctatccacatatgtgttgttagggtttatctgg 323
Query: 123 gcttcctatctctgtatagaagcctagtaacacttttaagggagtagttggtgcagttat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcttcctatctctgtatagaagcctagtaacacttttaagggagtagttggtgcagttat 383
Query: 183 tggttcaccttcatattatctcatctctaaagaatccttgttcttgacaattgtgttata 242
|||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 384 tggttc-ccttcatattatctcatctctaaagaatccttgttctggacaattgtgttata 442
Query: 243 tatatcttgaaaaacaaaagtaaagttttgctgatagtttttgttcaacttta-----ag 297
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 443 tatatcttgaaaaacaaaagtaaagttttgctgatagtttttgttcaactttattttaag 502
Query: 298 atattggaacaataagaacacagacaagcatgagactatatagcacaggacagagcacca 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atattggaacaataagaacacagacaagcatgagactatatagcacaggacagagcacca 562
Query: 358 gacttttctctctcaaactggaaaagattgcttgttttcttgtgtgctgtatattttagt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gacttttctctctcaaactggaaaagattgcttgttttcttgtgtgctgtatattttagt 622
Query: 418 ttgacagtggacatgagagaagcatgaaggatttgacatgggg---ggggcagggatgaa 474
||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 623 ttgacagtggaaatgagagaagcatgaaggatttgacatggggtggggggcagggatgaa 682
Query: 475 ggtagctactgattgtttggaaaaaggagccaccaatggggactggggaaaggtgtaggc 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ggtagctactgattgtttggaaaaaggagccaccaatggggactggggaaaggtgtaggc 742
Query: 535 ttagaaagatatacacac 552
||||||||||||||||||
Sbjct: 743 ttagaaagatatacacac 760
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 552
Length of database: 960
Length adjustment: 10
Effective length of query: 542
Effective length of database: 950
Effective search space: 514900
Effective search space used: 514900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_i07.g1 MSMg01no110_i07.g1 CHROMAT_FILE:
MSMg01no110_i07.g1 PHD_FILE: MSMg01no110_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:08 2005
(619 letters)
>mm_chr14_102926597_102927615
Length = 1019
Score = 601 bits (311), Expect = e-176
Identities = 314/315 (99%), Gaps = 1/315 (0%)
Strand = Plus / Minus
Query: 305 aagcatccacacatgaaacgattctgttcaagcttcttttaaaaaaatagcacttagtca 364
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1019 aagcatccacacatgaaacgattctgttcaagcttctttt-aaaaaatagcacttagtca 961
Query: 365 gcttataagttggtaggttcctatgacattttcacagtacctagttttggctgtctccct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 gcttataagttggtaggttcctatgacattttcacagtacctagttttggctgtctccct 901
Query: 425 tcccaccttcttattttctttctcctccaggcctcatccccatttcaacctttccatctc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 tcccaccttcttattttctttctcctccaggcctcatccccatttcaacctttccatctc 841
Query: 485 ttgtttccccaatttccatctccataccgcatatgtttccttccactctcccctcattct 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ttgtttccccaatttccatctccataccgcatatgtttccttccactctcccctcattct 781
Query: 545 tgttttctggcttctacacagagtcccccaaacatgaacacagaaatctgaaacttcaaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tgttttctggcttctacacagagtcccccaaacatgaacacagaaatctgaaacttcaaa 721
Query: 605 tcttggatttgcatg 619
|||||||||||||||
Sbjct: 720 tcttggatttgcatg 706
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space: 614481
Effective search space used: 614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
