AATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCATTAGCATAATACCAGGCTTAGAGAAAGGGGAAAGTAATTGACATT
TATTAAGAGGCTACTGTGATGCTTTGTTTTGACCTAGCAAGAGAAAGAGC
GTGTTTCACTTGCAGAAGTTTTCAAATTGTAGGTATGGTAAGAAAGAAAA
AGTAATCATAGGAGGTAAAAATATGTTATAAAAATGTTACCTTTAGAAAC
CATTACTGTGGGACATTAAAAAAAATTCAACCTCAAACTAGTGGGACACT
TCTTTTCTTCTGTCTGGTTTTAGTTGTGGCAGAAGGTGCTATATAGGTCC
CATGGAGAGAAAAAAAATCCATGGTATTATCCATCAAGACTGGGCATGTT
CAATACTAACCTATCTAACAAGATATGTCCATGGGTACAATAAAGGCATA
CTGTTATAGGAGTAACCAAGAATTTTCTGAGTGGCTCCAATATGTTTTCC
ACAGAAACTCCATCACTCCTGGTACTATAACCCTGGTCAAAAAGCTCACG
GTTTGGCGAAGTCACAGGCTCTGGAGATAGGGTAGGGGTTTCCTCCATCA
ATTTGCTTAAATGTCTTTTTTCACCCCCTTAGTTTTTCTCTTCTGTTTTT
TTTTTATTATTTTTCTTTTTTCCTACTAACACTTGACTTATTTTTATCTT
CTACCCTCTTCTTGTTTATCTGTATTCATC

GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCCTGAACCAGTGATGGATATCTGATTTT
AATGGTTTGATATGTTCTGGGACAAAGGAACTCTGGTTGGTTGGAACATG
GTTCTTGGGCTATCCAAACATCAGTGATGCTGTAAAGATCCACCAGAAGG
GCATGATAGTTTGTATGCATACTAGAGTGTTCAAGAAAAAAAAATAGCCC
TAGCCAGTGTCTCAAACTGGGTACTAGAAGCATGAGAAATAATCACCACA
AAATATAGATAATGGTAATATAAATCTAGATAAATTTACATAGTTTGGCT
GAAAATATGGTTCGGTCTGTAGAGTGTTTGCACTCAAAGATGAAGCTGTG
AATTCGATTCCCATTGTCACTTAAAGAGAATATTTGTCTTCTTTTTTCTT
TTTAAAGAAAGAGAGAATGAACTTGTGGAGGTGGAACAGTGGAAAAATGG
ACAGGTTCTAGCAAGAGACAAGGAATGTGAGACTGATATCAGAATATATT
GTGTGACAGAAAATTTATTCTCACCTACACTATTTTCGTATTCTAATTGC
TTGCTTATAACCCCAGACCTGGTCTTGACTCGCTATTGCCTCGTAATTCC
CCCACTTTCCCCCTTCCCCACCTCCCCCACCCATTATTATATTTCTCTTT
TTTCACCCTCCCACTG

Query= MSMg01no110_l06.b1 MSMg01no110_l06.b1 CHROMAT_FILE:
MSMg01no110_l06.b1 PHD_FILE: MSMg01no110_l06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:22 2005
         (483 letters)



>mm_chr14_98924809_98925691
          Length = 883

 Score =  926 bits (479), Expect = 0.0
 Identities = 479/479 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattccattagcataataccaggcttagagaaaggggaaagtaattgacatttattaag 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccattagcataataccaggcttagagaaaggggaaagtaattgacatttattaag 264

                                                                       
Query: 65  aggctactgtgatgctttgttttgacctagcaagagaaagagcgtgtttcacttgcagaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aggctactgtgatgctttgttttgacctagcaagagaaagagcgtgtttcacttgcagaa 324

                                                                       
Query: 125 gttttcaaattgtaggtatggtaagaaagaaaaagtaatcataggaggtaaaaatatgtt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gttttcaaattgtaggtatggtaagaaagaaaaagtaatcataggaggtaaaaatatgtt 384

                                                                       
Query: 185 ataaaaatgttacctttagaaaccattactgtgggacattaaaaaaaattcaacctcaaa 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ataaaaatgttacctttagaaaccattactgtgggacattaaaaaaaattcaacctcaaa 444

                                                                       
Query: 245 ctagtgggacacttcttttcttctgtctggttttagttgtggcagaaggtgctatatagg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctagtgggacacttcttttcttctgtctggttttagttgtggcagaaggtgctatatagg 504

                                                                       
Query: 305 tcccatggagagaaaaaaaatccatggtattatccatcaagactgggcatgttcaatact 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tcccatggagagaaaaaaaatccatggtattatccatcaagactgggcatgttcaatact 564

                                                                       
Query: 365 aacctatctaacaagatatgtccatgggtacaataaaggcatactgttataggagtaacc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aacctatctaacaagatatgtccatgggtacaataaaggcatactgttataggagtaacc 624

                                                                      
Query: 425 aagaattttctgagtggctccaatatgttttccacagaaactccatcactcctggtact 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagaattttctgagtggctccaatatgttttccacagaaactccatcactcctggtact 683


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 483
Length of database: 883
Length adjustment: 10
Effective length of query: 473
Effective length of database: 873
Effective search space:   412929
Effective search space used:   412929
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no110_l06.g1 MSMg01no110_l06.g1 CHROMAT_FILE:
MSMg01no110_l06.g1 PHD_FILE: MSMg01no110_l06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:22 2005
         (411 letters)



>mm_chr14_99090011_99090821
          Length = 811

 Score =  795 bits (411), Expect = 0.0
 Identities = 411/411 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   cctgaaccagtgatggatatctgattttaatggtttgatatgttctgggacaaaggaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 cctgaaccagtgatggatatctgattttaatggtttgatatgttctgggacaaaggaact 552

                                                                       
Query: 61  ctggttggttggaacatggttcttgggctatccaaacatcagtgatgctgtaaagatcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctggttggttggaacatggttcttgggctatccaaacatcagtgatgctgtaaagatcca 492

                                                                       
Query: 121 ccagaagggcatgatagtttgtatgcatactagagtgttcaagaaaaaaaaatagcccta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ccagaagggcatgatagtttgtatgcatactagagtgttcaagaaaaaaaaatagcccta 432

                                                                       
Query: 181 gccagtgtctcaaactgggtactagaagcatgagaaataatcaccacaaaatatagataa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 gccagtgtctcaaactgggtactagaagcatgagaaataatcaccacaaaatatagataa 372

                                                                       
Query: 241 tggtaatataaatctagataaatttacatagtttggctgaaaatatggttcggtctgtag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tggtaatataaatctagataaatttacatagtttggctgaaaatatggttcggtctgtag 312

                                                                       
Query: 301 agtgtttgcactcaaagatgaagctgtgaattcgattcccattgtcacttaaagagaata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 agtgtttgcactcaaagatgaagctgtgaattcgattcccattgtcacttaaagagaata 252

                                                              
Query: 361 tttgtcttcttttttctttttaaagaaagagagaatgaacttgtggaggtg 411
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tttgtcttcttttttctttttaaagaaagagagaatgaacttgtggaggtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space:   322404
Effective search space used:   322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)