Query= MSMg01no110_p23.b1 MSMg01no110_p23.b1 CHROMAT_FILE:
MSMg01no110_p23.b1 PHD_FILE: MSMg01no110_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:45 2005
(645 letters)
>mm_chr14_96418394_96419438
Length = 1045
Score = 1181 bits (611), Expect = 0.0
Identities = 632/639 (98%)
Strand = Plus / Plus
Query: 7 attccagtggctagcatgtggatttggagaagaactggtgagtctgggctacacacttcc 66
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 attccagtggccagaatgtggatttggagaagaactggtgagtctgggctacacacttcc 266
Query: 67 ttgctgtgttttgtatgtgccctccatggctattttcctatttgttctctcattagccaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ttgctgtgttttgtatgtgccctccatggctattttcctatttgttctctcattagccaa 326
Query: 127 aaaggctactccaggtgattagagaaagaattatttaaaatgatcataccattctctctg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aaaggctactccaggtgattagagaaagaattatttaaaatgatcataccattctctctg 386
Query: 187 attaagacataatattttttaatcaccttgtaagctgatggtgaaaatgtgtattcaaaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 attaagacataatattttttaatcaccttgtaagctgatggtgaaaatgtgtattcaaaa 446
Query: 247 ataattaccttcaattatgtttgctctgaactttttgttacttaaaaagcaaatgagaat 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ataattaccttcaattatgtttgctctgaactttttgttacttaaaaagcaaatgagaat 506
Query: 307 gcattttaaataagagccactaatgctatttactaggacaacatagtttgtaatctgaaa 366
|||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 507 gcatttaaaataagagccactaatgctatttactaggacaacatagtttgtaacctgaaa 566
Query: 367 gcatgtaacattttaagataggcaaatgacagtttaatataaaaatataattcttataaa 426
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gcatgtaacactttaagataggcaaatgacagtttaatataaaaatataattcttataaa 626
Query: 427 catgcagaagttcaaaaatcccatcaaatgtcataataccagaagcaaagagaaaccaaa 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 catgcagaagttcaaaaatcccatcaaatgtcataataccagaagcaaagagaaaccaaa 686
Query: 487 tctaaagtaaactgtacaaggtacacacaagtaaatttaagattatgaaaatgatcagaa 546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tctaaagtaaactgtacaaggtacacacaagtaaatttaagattatgaaaatgatcagaa 746
Query: 547 tgtttgtgagcttaacatatttcacacaaaagaattaaagctttgcaaatgattggttaa 606
|| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tggttgtgagcttaagatatttcacacaaaagaattaaagctttgcaaatgattggttaa 806
Query: 607 cagaattgaaaaaatagaagagaacctgttcggcactta 645
|||||||||||||||||||||||||||||||||||||||
Sbjct: 807 cagaattgaaaaaatagaagagaacctgttcggcactta 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_p23.g1 MSMg01no110_p23.g1 CHROMAT_FILE:
MSMg01no110_p23.g1 PHD_FILE: MSMg01no110_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:46 2005
(288 letters)
>mm_chr14_96520834_96521519
Length = 686
Score = 416 bits (215), Expect = e-121
Identities = 275/307 (89%), Gaps = 21/307 (6%)
Strand = Plus / Minus
Query: 1 agtaaaatagatatatttgcctgaattatgaaaagaaacattttagggagaaagtgcact 60
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 agtaaaatacatata-ttgcctgaattatgaaaagaaacattttagggagaaagtgcact 286
Query: 61 attagaactaagttctttgacttttcactagttacttcaaatgcaagggaattctttacc 120
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 285 attagaactaagttctttgacttttcactagttacttcaattgcaagagaattctttacc 226
Query: 121 caaggggtgtcagatac-------------------aaaaaaaaaggaattaatttttta 161
||| ||| |||| ||| |||||||||||||| ||||||| |
Sbjct: 225 caa-gggcatcaggtacaaaaaaaaaaaaaaaaaaaaaaaaaaaaggaatgaatttttaa 167
Query: 162 aatattatttcatgaaaatgctgcaggatacagttggatgtttcacattggtaaatccct 221
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 166 aatattatttcatgaaaatgctgcaggatacagttggttgtttcacattggtaaatccct 107
Query: 222 agtgtttccacaagagatgctgtgtaaattaagtactgtttatgtgtttggaaaaattcc 281
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 106 agtgtttccacaagagatgctgtgtaaattaagtactgtttatttgtttggaaaaattcc 47
Query: 282 tgcttca 288
||||||
Sbjct: 46 cgcttca 40
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 686
Length adjustment: 9
Effective length of query: 279
Effective length of database: 677
Effective search space: 188883
Effective search space used: 188883
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
