Query= MSMg01no111_b05.b1 MSMg01no111_b05.b1 CHROMAT_FILE:
MSMg01no111_b05.b1 PHD_FILE: MSMg01no111_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:56 2005
(617 letters)
>mm_chr14_103375923_103376938
Length = 1016
Score = 1025 bits (530), Expect = 0.0
Identities = 605/650 (93%), Gaps = 37/650 (5%)
Strand = Plus / Minus
Query: 1 attacaagtaccataaaactgac--gttttaaacttaa-a--aaatttggtatttttatt 55
||||||||||||||||||||||| |||||||| || | ||||||||||||||||||
Sbjct: 993 attacaagtaccataaaactgacatgttttaaa---aatagtaaatttggtatttttatt 937
Query: 56 gtaaaactcttagttacgtctttgcttaaaattttattgtgtttcctctcactacaaatc 115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 936 gtaaaactcttagttacgtctttgcttaaaattttattgtgtttcctctcactacaaatc 877
Query: 116 ttttaaaatctgaatattttggataacgtaagtctct----------------------- 152
|||||||||||||||||||||||||| ||||||||||
Sbjct: 876 ttttaaaatctgaatattttggataatgtaagtctctctctctctctctctctctctctc 817
Query: 153 ----t-tctctctctctcttaagtagtgaataaaacacagtgttctctgagtccacagta 207
| ||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 816 tctctctctctctctctctcaagtagtgaataaaacacagtgttctctgtgtccacagta 757
Query: 208 cttggaagaagttttcacatacctggaagtaggttatgttatagctaacttttcttggtg 267
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 cttggaagaagttttcacatacctggaagtaggttatgttatagctaacttttcttggtg 697
Query: 268 acagttttggatagtacacatctaaaaatattaatactggaggatttagattctttccaa 327
||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct: 696 acagttttggatagtacacatctcaaaatattaatactggaggatttagattctttacaa 637
Query: 328 ggcccattaaacaaagatggaagaatcctattagaagacctccactggagtcagctgttg 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 ggcccattaaacaaagatggaagaatcctattagaagacctccactggagtcagctgttg 577
Query: 388 gatggtaggagggttgaccagttgaccaagaatgcttgccactttattttataatatttt 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gatggtaggagggttgaccagttgaccaagaatgcttgccactttattttataatatttt 517
Query: 448 tccaagccagttttgtttgtttaaaatgtgtttcaaggtgttcagacatcaatctttaat 507
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 516 tccaagccagttttgtttgtttaaaatgtgtttcaaggtgtgcagacatcaat-tttaat 458
Query: 508 gtaaactgctatacaactgtctttgtgacttgatagccatgtacactttgctataactat 567
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 457 gtaaactgctatacaactgtctttgtgacttgatagccatgtaaactttgctataactat 398
Query: 568 tgaatacaaacgatatatactcattcattaccactgatcatatctgttgg 617
|||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 397 tgaatacaaacgatatatactcattcattaccactgatcatatccgttgg 348
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1016
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1006
Effective search space: 610642
Effective search space used: 610642
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_b05.g1 MSMg01no111_b05.g1 CHROMAT_FILE:
MSMg01no111_b05.g1 PHD_FILE: MSMg01no111_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:56 2005
(654 letters)
>mm_chr14_103258348_103259398
Length = 1051
Score = 1237 bits (640), Expect = 0.0
Identities = 650/654 (99%), Gaps = 3/654 (0%)
Strand = Plus / Plus
Query: 1 aacagaaacacaagagcttcaggtttttggagactcccttttacaactgaatccaaacca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacagaaacacaagagcttcaggtttttggagactcccttttacaactgaatccaaacca 260
Query: 61 tattttctccctggacagctggaaagcattaagagtcatgtgaatcactttctttcctct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattttctccctggacagctggaaagcattaagagtcatgtgaatcactttctttcctct 320
Query: 121 gggaacaaaatacattaaaataaattgccaaaggagacgtggtgacttacaaagcatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggaacaaaatacattaaaataaattgccaaaggagacgtggtgacttacaaagcatgtt 380
Query: 181 ggtcctctatcatcactgcttttcaaaggccaaaaaaatgaagtgttaccagtgaatgga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggtcctctatcatcactgcttttcaaaggccaaaaaaatgaagtgttaccagtgaatgga 440
Query: 241 tttccatatctccataacaacttttatgcttttcaaacttgcctgcgatccttactttta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttccatatctccataacaacttttatgcttttcaaacttgcctgcgatccttactttta 500
Query: 301 tagtcaatatttaattaggaacacaactctgggaacatctgtatctggggagcaaggcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagtcaatatttaattaggaacacaactctgggaacatctgtatctggggagcaaggcaa 560
Query: 361 agtcaccttaaaagcaccgtgtcctgtaggtcacatatgctctagtgaagccaagaggag 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtcaccttaaaagcatcgtgtcctgtaggtcacatatgctctagtgaagccaagaggag 620
Query: 421 taactgcaaaataaaagcagatgtgaatctggcacaatcacagccgtcccttccaacatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 taactgcaaaataaaagcagatgtgaatctggcacaatcacagccgtcccttccaacatg 680
Query: 481 agcagcacattcaaactcacatttttctttccacttggaatcagttgcatcactgaattc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcagcacattcaaactcacatttttctttccacttggaatcagttgcatcactgaattc 740
Query: 541 tttcaaataaatgaaaaattgagcagcacttgccagaaaaaaaaaaattacaccacgaaa 600
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 741 tttcaaataaatgaaaaattgagcagcacttgccagaaaaaaaaa--ttacaccacgaaa 798
Query: 601 ctcccacatgaattttgaaaatccatttgcatttgaatgatgcaaatttgtgat 654
|||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 799 ctcccacatgaattttgaaaatccatttgcatttgaatgatgcaaatt-gtgat 851
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 654
Length of database: 1051
Length adjustment: 10
Effective length of query: 644
Effective length of database: 1041
Effective search space: 670404
Effective search space used: 670404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
