Query= MSMg01no112_b22.b1 MSMg01no112_b22.b1 CHROMAT_FILE:
MSMg01no112_b22.b1 PHD_FILE: MSMg01no112_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:10 2005
(436 letters)
>mm_chr14_73518344_73519179
Length = 836
Score = 721 bits (373), Expect = 0.0
Identities = 418/435 (96%), Gaps = 4/435 (0%)
Strand = Plus / Plus
Query: 6 ggaattctctcctctttgcctcctaactgcagaagcgatgtgggaggggctgcctcatgc 65
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattctctcctctttgcttcctaactgcagaagcgatgtgggaggggctgcctcatgc 261
Query: 66 tcctcccaccacggtaccacggagagaaggacgggtaccctcaaactgtgagctgtggta 125
|||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||
Sbjct: 262 tcctcccaccacggtaccacggagagaaggacaggtaccctcaaactttgagctgtggta 321
Query: 126 aac----acttacttaaggagattctgccagtaattttgacacagcaacaggaaccatgc 181
||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 322 aacacttacttacttaaggagattctgccagttattttgacacagcaacaggaaccgtgc 381
Query: 182 acactccttcagtgaatactgaacttccaccatgtacatggtcctagcgatgcagtaagg 241
||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||
Sbjct: 382 acactccttcagtgaatactgcacttccaccatgtacatagtcctggcgatgcagtaagg 441
Query: 242 actgtggccctgcgtcttaacagatttctaagcaaactgagatgctgggggtctctggga 301
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 442 actgtggccctgcatcttaacagattcctaagcaaactgagatgctgggggtctctggga 501
Query: 302 agctgggatgctggggggtctctgagagtctcagggaagccgaccaggtctgcgttgccc 361
||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 502 agctgggatgctggggggtctctgagagtctcagggaagcctaccaggcctgcgttgccc 561
Query: 362 aagcttcgcttccaccccgctgcatcagcgtttcctgtttcacagctggtacctttctag 421
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 562 aagcttcgcttccaccccgctgcatcagcgtttcctgtttcacagttggtacctttctag 621
Query: 422 tgcctgacacacagg 436
|||||||||||||||
Sbjct: 622 tgcctgacacacagg 636
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 436
Length of database: 836
Length adjustment: 9
Effective length of query: 427
Effective length of database: 827
Effective search space: 353129
Effective search space used: 353129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no112_b22.g1 MSMg01no112_b22.g1 CHROMAT_FILE:
MSMg01no112_b22.g1 PHD_FILE: MSMg01no112_b22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:11 2005
(528 letters)
>mm_chr14_73687286_73688213
Length = 928
Score = 737 bits (381), Expect = 0.0
Identities = 404/413 (97%), Gaps = 4/413 (0%)
Strand = Plus / Minus
Query: 118 attctcaatttagggatttggagagaagactggactcaggcgtgaaacccaacatcccac 177
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 928 attctcaatttagggatttggagagaagactggacccaggcgtgaaacccaacatcccac 869
Query: 178 atggtggcttacagctgtttgtatttctagttctgtggggtgggatgcgatgacctcttc 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 868 atggtggcttacagctgtttgtatttctagttctgtggggtgggatgcgatgacctcttc 809
Query: 238 aggcccctacagacaccaggcacacaagtcgtgcacaaacacacagataggtaaaatatt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 808 aggcccctacagacaccaggcacacaagtcgtgcacaaacacacagataggtaaaatatt 749
Query: 298 cctactcattaaaaaatttgatttacaaatcctaaattcctgaacagtacct--cagtgt 355
|||||||||||||||| || ||||||||||||||||||||||||||||| | ||||||
Sbjct: 748 cctactcattaaaaaacttcatttacaaatcctaaattcctgaacagta--tggcagtgt 691
Query: 356 tcttctctgtaaatagctcaagtaatcctggagatttcctgccccacgaaagcactggca 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 tcttctctgtaaatagctcaagtaatcctggagatttcctgccccacgaaagcactggca 631
Query: 416 ttgaagagattgattgaaatgcaaattgtgcatatattaattcataaaaatctgttgatt 475
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 630 ttgaagagattgattgaaatgcaaattgtgcatatattaattcataaaaagctgttgatt 571
Query: 476 ctaatgagtggtcgttctatggaaaaattatcaaggtaaagtgttaagttgac 528
||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 570 ctaatgagtggtcattctatggaaaaattatcaaggtaaagtgttaagttgac 518
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
