Query= MSMg01no113_l01.b1 MSMg01no113_l01.b1 CHROMAT_FILE:
MSMg01no113_l01.b1 PHD_FILE: MSMg01no113_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:12 2005
(403 letters)
>mm_chr14_68476655_68477453
Length = 799
Score = 685 bits (354), Expect = 0.0
Identities = 386/398 (96%), Gaps = 6/398 (1%)
Strand = Plus / Plus
Query: 7 gaattctgcacaactctcagctgatgcaaatgttctgagcggccgggctaggctatgttt 66
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 207 gaattctgcacaactgtcagctgatgcaaatgttctgagcggccaggctaggctatgttt 266
Query: 67 cataatttaggtgaagtaaatgcatttcttgttgtcctttcttattagcatatattattg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 cataatttaggtgaagtaaatgcatttcttgttgtcctttcttattagcatatattattg 326
Query: 127 cacagaatggcaggctttcttgaaacactggcttgtgaaactttcaactctggagagttt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 cacagaatggcaggctttcttgaaacactggcttgtgaaactttcaactctggagagttt 386
Query: 187 ataatgatgtaatcacaagttcaggaacatctgcatttgctgactcagtactttgaacac 246
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 387 ataatgatgtaatcacaagttcaggaacatctgcatttgctgactcaatactttgaacac 446
Query: 247 agtaaactgggcatcccgcctttcactggcagatccagttagaacagcactactttgcct 306
|||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 447 agtaaactgggcatcctgcctttcactggcagatccagttagagcagcactactttgcct 506
Query: 307 ttacaagtgacactccgtggctgcccagaaatggcccgctgggaagaggattcctctggg 366
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttacaagtgacattccgtggctgcccagaaatggcccgctgggaagaggattcctctggg 566
Query: 367 gggg-gggggcagagaaaaatattccaagtgatgggtc 403
|||| ||||| | |||| ||||||||||||||||||
Sbjct: 567 ggggaggggg--g-gaaa--tattccaagtgatgggtc 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 799
Length adjustment: 9
Effective length of query: 394
Effective length of database: 790
Effective search space: 311260
Effective search space used: 311260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no113_l01.g1 MSMg01no113_l01.g1 CHROMAT_FILE:
MSMg01no113_l01.g1 PHD_FILE: MSMg01no113_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:12 2005
(617 letters)
>mm_chr14_68538586_68539602
Length = 1017
Score = 592 bits (306), Expect = e-173
Identities = 309/310 (99%)
Strand = Plus / Minus
Query: 308 accaatgggggtgggctgtgaggtttcaaagccttgtcacagtcccagtttgttctctct 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 accaatgggggtgggctgtgaggtttcaaagccttgtcacagtcccagtttgttctctct 958
Query: 368 acttcctgcacgctcccagcttctgttcttaccaccatgccttcactgcctccatggaac 427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957 acttcctgcacgctcccagcttctgttcttaccaccatgccttcactgcctccatggaac 898
Query: 428 catagaccaaataaactctatctcaacacattgccttggtcatggtatcttttctcagtg 487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 catagaccaaataaactctatctcaacacattgccttggtcatggtatcttttctcagtg 838
Query: 488 gtagcaaagtaactaagacaccgggtgttcctgcgggagaccagctaaggaaccaaattc 547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 gtagcaaagtaactaagacaccgggtgttcctgcgggagaccagctaaggaaccaaattc 778
Query: 548 ataagacctccgagttctgtcccccttgggtatgggacataaaagtcctgagaactggat 607
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 ataagacctcagagttctgtcccccttgggtatgggacataaaagtcctgagaactggat 718
Query: 608 tcttggcaat 617
||||||||||
Sbjct: 717 tcttggcaat 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
