Query= MSMg01no115_f03.b1 MSMg01no115_f03.b1 CHROMAT_FILE:
MSMg01no115_f03.b1 PHD_FILE: MSMg01no115_f03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:14 2005
(421 letters)
>mm_chr14_100373625_100374444
Length = 820
Score = 745 bits (385), Expect = 0.0
Identities = 409/417 (98%), Gaps = 1/417 (0%)
Strand = Plus / Minus
Query: 5 gaattcttagtcatggaaatgaataacagcgtgatcatgccccccaccccccccaaaaat 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 620 gaattcttagtcatggaaatgaataacagcgtgatcatgccccccacccccccc-aaaat 562
Query: 65 acaggaagaacggtttaatgatgtcacaatagattgaataggaacctccctgggcgtggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaggaagaacggtttaatgatgtcacaatagattgaataggaacctccctgggcgtggg 502
Query: 125 tctgggctccactgttggcttctcagtgtcagtggcaataaccacaaatgatgggttaaa 184
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 tctgggctccactgttggcttctcactgtcagtggcaataaccacaaatgatgggttaaa 442
Query: 185 aagagtagtgtgttataattaccaagtcgttcttatttatggattccatggtgtttctaa 244
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 aagagcagtgtgttataattaccaagtcattcttatttatggattccatggtgtttctaa 382
Query: 245 acagttcttcaagtgagtgatatcattttgcaaacccacagaattgaggtgatttaattt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acagttcttcaagtgagtgatatcattttgcaaacccacagaattgaggtgatttaattt 322
Query: 305 gtatgctgtaactaaggacacaattcattcaacatgaaatgtcctttctgccgtgaggac 364
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgtgctgtaactaaggacacaattcattcaacatgaaatgtcctttctgccgtgaggac 262
Query: 365 caacccctctttcttgcctacttcctggaaggggaaggattgtgattgccatttgca 421
||||| |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 261 caaccgctctttcttgcctattttctggaaggggaaggattgtgattgccatttgca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 820
Length adjustment: 9
Effective length of query: 412
Effective length of database: 811
Effective search space: 334132
Effective search space used: 334132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no115_f03.g1 MSMg01no115_f03.g1 CHROMAT_FILE:
MSMg01no115_f03.g1 PHD_FILE: MSMg01no115_f03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:21:14 2005
(163 letters)
>mm_chr14_100202428_100202991
Length = 564
Score = 294 bits (152), Expect = 2e-84
Identities = 161/164 (98%), Gaps = 1/164 (0%)
Strand = Plus / Plus
Query: 1 actgggcagcacaagcaagccatgattctcagtcttccaaccttaacctctggagttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgggcagcacaagcaagccatgattctcagtcttccaaccttaacctctggagttgaa 260
Query: 61 ggga-ttttcagagctacaaggccttcttctttaaaagcctggtcaaatagtttttcatt 119
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggatttttcagagctacaagaccttcttctttaaaagcctggtcaaatagtttttcatt 320
Query: 120 gtggcgcacacctttaatcccagcactcgggaggcagaggcagg 163
||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 gtggcgcacacctttaatcccagtactcgggaggcagaggcagg 364
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 564
Length adjustment: 8
Effective length of query: 155
Effective length of database: 556
Effective search space: 86180
Effective search space used: 86180
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
